RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 C5orf30Q96GV9 206 aa10.91□□□□□ -0.66
CTHRC1-201ENST00000330295 PHB2Q99623 299 aa10.91□□□□□ -0.66
CTHRC1-201ENST00000330295 CCL28Q9NRJ3 127 aa10.91□□□□□ -0.66
CTHRC1-201ENST00000330295 ZNF355PQ9NSJ1 428 aa10.91□□□□□ -0.66
CTHRC1-201ENST00000330295 RABL2AQ9UBK7 228 aaPredicted RBP10.91□□□□□ -0.66
CTHRC1-201ENST00000330295 EXTL2Q9UBQ6 330 aa10.91□□□□□ -0.66
CTHRC1-201ENST00000330295 ANAPC10Q9UM13 185 aa10.91□□□□□ -0.66
CTHRC1-201ENST00000330295 RABL2BQ9UNT1 228 aa10.91□□□□□ -0.66
CTHRC1-201ENST00000330295 RBMY1A1P0DJD3 496 aaKnown RBP10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 INAFM2P0DMQ5 153 aa10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 HLA-DMAP28067 261 aa10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 MFAP2P55001 183 aa10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 PRSS8Q16651 343 aa10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 OR2B11Q5JQS5 317 aa10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 MMD2Q8IY49 270 aa10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 OR52B4Q8NGK2 314 aa10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 FCAMRQ8WWV6 532 aa10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 ZNF2Q9BSG1 426 aaPredicted RBP10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 CCDC59Q9P031 241 aaKnown RBP10.9□□□□□ -0.66
CTHRC1-201ENST00000330295 DNAH5Q8TE73 4624 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 CCDC160A6NGH7 325 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 H3BUA1 57 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 MPPED1O15442 326 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 RBFOX2O43251 390 aaKnown RBP eCLIP10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 TNFSF12O43508 249 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 CRYGBP07316 175 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 HRH1P35367 487 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 MRPS10P82664 201 aaKnown RBP10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 SPCS2Q15005 226 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 TNXAQ16473 311 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 AADACL3Q5VUY0 350 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 ZNF343Q6P1L6 599 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 SPAG16Q8N0X2 631 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 POM121L12Q8N7R1 296 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 MOB3AQ96BX8 217 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 SPIN2AQ99865 258 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 SPIN2BQ9BPZ2 258 aa10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 SRRM2Q9UQ35 2752 aaKnown RBP10.89□□□□□ -0.67
CTHRC1-201ENST00000330295 SRRM4A7MD48 611 aaKnown RBP10.88□□□□□ -0.67
CTHRC1-201ENST00000330295 IGLV2-14P01704 120 aa10.88□□□□□ -0.67
CTHRC1-201ENST00000330295 SAA1P0DJI8 122 aaPredicted RBP10.88□□□□□ -0.67
CTHRC1-201ENST00000330295 TBPP20226 339 aa10.88□□□□□ -0.67
CTHRC1-201ENST00000330295 RPL30P62888 115 aaKnown RBP10.88□□□□□ -0.67
CTHRC1-201ENST00000330295 STPG3Q8N7X2 389 aa10.88□□□□□ -0.67
CTHRC1-201ENST00000330295 OR2A7Q96R45 310 aa10.88□□□□□ -0.67
CTHRC1-201ENST00000330295 TECRQ9NZ01 308 aaKnown RBP10.88□□□□□ -0.67
CTHRC1-201ENST00000330295 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
CTHRC1-201ENST00000330295 GPR31O00270 319 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 MAS1LP35410 378 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 ERVK-16P61578 105 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 PJVKQ0ZLH3 352 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 RNASE10Q5GAN6 216 aaKnown RBP10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 SOHLH1Q5JUK2 328 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 SLC25A42Q86VD7 318 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 LYSMD2Q8IV50 215 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 OR5T1Q8NG75 326 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 OR51H1Q8NH63 302 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 OR4A5Q8NH83 315 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 DIRAS2Q96HU8 199 aa10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 C6orf62Q9GZU0 229 aaPredicted RBP10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 C11orf68Q9H3H3 251 aaKnown RBP10.87□□□□□ -0.67
CTHRC1-201ENST00000330295 KIR2DL5BA0A0G2JN68 375 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 KIR2DL5BA0A0G2JPC4 375 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 EPM2AB3EWF7 344 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 C11orf94C9JXX5 98 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 HPRT1P00492 218 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 FOLR2P14207 255 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 NQO2P16083 231 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 EDN2P20800 178 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 GNRHRP30968 328 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 TAS2R31P59538 309 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 DEFA5Q01523 94 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 SSBP1Q04837 148 aaKnown RBP10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 EIF4EBP1Q13541 118 aaPredicted RBP10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 TM4SF20Q53R12 229 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 IDO2Q6ZQW0 420 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 ZNF818PQ6ZRF7 136 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 KIR2DL5AQ8N109 375 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 KIR2DL5BQ8NHK3 375 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 DYNC2LI1Q8TCX1 351 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 SRSF12Q8WXF0 261 aaKnown RBP10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 ZNF430Q9H8G1 570 aaPredicted RBP10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 PLEKHA2Q9HB19 425 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 HRASLSQ9HDD0 168 aa10.86□□□□□ -0.67
CTHRC1-201ENST00000330295 IGHV4-4A0A075B6R2 117 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 DPPA5A6NC42 116 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 C2orf70A6NJV1 201 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 H3BMQ9 156 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 GABARAPH6UMI1 98 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 CTDSP2O14595 271 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 PGLYRP1O75594 196 aaPredicted RBP10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 KBTBD11O94819 623 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 IL18Q14116 193 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 ANKRD55Q3KP44 614 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 RNASE12Q5GAN4 147 aaKnown RBP10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 SLC38A6Q8IZM9 456 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 TMEM61Q8N0U2 210 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 VKORC1L1Q8N0U8 176 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 DMBX1Q8NFW5 382 aa10.85□□□□□ -0.67
CTHRC1-201ENST00000330295 OR52I2Q8NH67 350 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms