RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 TPTE2P1Q5T6R2 138 aa12.04□□□□□ -0.48
TPM3-205ENST00000328159 ZNF787Q6DD87 383 aa12.04□□□□□ -0.48
TPM3-205ENST00000328159 C1orf122Q6ZSJ8 110 aa12.04□□□□□ -0.48
TPM3-205ENST00000328159 RPP25LQ8N5L8 163 aaKnown RBP12.04□□□□□ -0.48
TPM3-205ENST00000328159 TEX45Q8NA69 505 aa12.04□□□□□ -0.48
TPM3-205ENST00000328159 OR10W1Q8NGF6 305 aa12.04□□□□□ -0.48
TPM3-205ENST00000328159 IGFBPL1Q8WX77 278 aa12.04□□□□□ -0.48
TPM3-205ENST00000328159 SMDT1Q9H4I9 107 aa12.04□□□□□ -0.48
TPM3-205ENST00000328159 KPTNQ9Y664 436 aa12.04□□□□□ -0.48
TPM3-205ENST00000328159 A0A1W2PN81 502 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 MAP1LC3B2A6NCE7 125 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 INS-IGF2F8WCM5 200 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 RNASE2P10153 161 aaKnown RBP12.03□□□□□ -0.48
TPM3-205ENST00000328159 HTR1DP28221 377 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 CHRNA7P36544 502 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 KLRD1Q13241 179 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 HAGHQ16775 308 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 MRGPRG-AS1Q2M3A8 158 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 ARSJQ5FYB0 599 aaPredicted RBP12.03□□□□□ -0.48
TPM3-205ENST00000328159 HCP5Q6MZN7 132 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 OR10G4Q8NGN3 311 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 OR10G9Q8NGN4 311 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 OR10G7Q8NGN6 311 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 CLDND2Q8NHS1 167 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 MAP1LC3BQ9GZQ8 125 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 NPVFQ9HCQ7 196 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 TPSG1Q9NRR2 321 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 DPM3Q9P2X0 92 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 KLF2Q9Y5W3 355 aaPredicted RBP12.03□□□□□ -0.48
TPM3-205ENST00000328159 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
TPM3-205ENST00000328159 A0A1W2PPI3 338 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 CGB1A6NKQ9 187 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 ODF3BA8MYP8 253 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 E7EUB6 86 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 SOX15O60248 233 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 IGHV4-39P01824 125 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 ERHP84090 104 aaKnown RBP12.02□□□□□ -0.48
TPM3-205ENST00000328159 PSG5Q15238 335 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 ZNF506Q5JVG8 444 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 C10orf55Q5SWW7 151 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 LDLRAD2Q5SZI1 272 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 ZNF843Q8N446 348 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.02□□□□□ -0.48
TPM3-205ENST00000328159 SUN5Q8TC36 379 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 MGST2Q99735 147 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 SPOCK3Q9BQ16 436 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 BPESC1Q9GZL8 116 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 SLC35B3Q9H1N7 401 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 SLC39A9Q9NUM3 307 aa12.02□□□□□ -0.48
TPM3-205ENST00000328159 SPTAN1Q13813 2472 aaKnown RBP12.02□□□□□ -0.48
TPM3-205ENST00000328159 CTXND1A0A1B0GTU2 59 aa12.02□□□□□ -0.49
TPM3-205ENST00000328159 FNDC10F2Z333 226 aa12.02□□□□□ -0.49
TPM3-205ENST00000328159 SNAPINO95295 136 aa12.02□□□□□ -0.49
TPM3-205ENST00000328159 CRYGBP07316 175 aa12.02□□□□□ -0.49
TPM3-205ENST00000328159 CNTFRP26992 372 aa12.02□□□□□ -0.49
TPM3-205ENST00000328159 CEACAM3P40198 252 aa12.02□□□□□ -0.49
TPM3-205ENST00000328159 OPRK1P41145 380 aa12.02□□□□□ -0.49
TPM3-205ENST00000328159 FGF8P55075 233 aaPredicted RBP12.02□□□□□ -0.49
TPM3-205ENST00000328159 ICAM4Q14773 271 aa12.02□□□□□ -0.49
TPM3-205ENST00000328159 ACOT6Q3I5F7 207 aaPredicted RBP12.02□□□□□ -0.49
TPM3-205ENST00000328159 VMO1Q7Z5L0 202 aa12.02□□□□□ -0.49
TPM3-205ENST00000328159 ACTR3CQ9C0K3 210 aaPredicted RBP12.02□□□□□ -0.49
TPM3-205ENST00000328159 LSM4Q9Y4Z0 139 aaKnown RBP12.02□□□□□ -0.49
TPM3-205ENST00000328159 LOC102723971A0A1B0GUV8 181 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 PDLIM4P50479 330 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 LMO4P61968 165 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 LCN2P80188 198 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 PAX2Q02962 417 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 PRSS8Q16651 343 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 FAM122CQ6P4D5 195 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 MMD2Q8IY49 270 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 C1orf159Q96HA4 380 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 CCL19Q99731 98 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 GGTLC1Q9BX51 225 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 SLC25A22Q9H936 323 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 UNKLQ9H9P5 680 aaKnown RBP12.01□□□□□ -0.49
TPM3-205ENST00000328159 GNG13Q9P2W3 67 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 TMA7Q9Y2S6 64 aaKnown RBP12.01□□□□□ -0.49
TPM3-205ENST00000328159 ZFYVE26Q68DK2 2539 aa12.01□□□□□ -0.49
TPM3-205ENST00000328159 TIMM23O14925 209 aa12□□□□□ -0.49
TPM3-205ENST00000328159 EIF3GO75821 320 aaKnown RBP eCLIP12□□□□□ -0.49
TPM3-205ENST00000328159 TEPPQ6URK8 271 aa12□□□□□ -0.49
TPM3-205ENST00000328159 RNF5Q99942 180 aa12□□□□□ -0.49
TPM3-205ENST00000328159 SIRPDQ9H106 197 aa12□□□□□ -0.49
TPM3-205ENST00000328159 KCNIP2Q9NS61 270 aa12□□□□□ -0.49
TPM3-205ENST00000328159 SIGLEC9Q9Y336 463 aa12□□□□□ -0.49
TPM3-205ENST00000328159 USP9XQ93008 2570 aaPredicted RBP12□□□□□ -0.49
TPM3-205ENST00000328159 IGHV2-70DA0A0C4DH43 119 aa12□□□□□ -0.49
TPM3-205ENST00000328159 DNASE2O00115 360 aaPredicted RBP12□□□□□ -0.49
TPM3-205ENST00000328159 CYB5BO43169 146 aa12□□□□□ -0.49
TPM3-205ENST00000328159 SRP19P09132 144 aaKnown RBP12□□□□□ -0.49
TPM3-205ENST00000328159 OR13C7P0DN81 318 aa12□□□□□ -0.49
TPM3-205ENST00000328159 NPBWR1P48145 328 aa12□□□□□ -0.49
TPM3-205ENST00000328159 WT1-ASQ06250 92 aa12□□□□□ -0.49
TPM3-205ENST00000328159 KHDC3LQ587J8 217 aa12□□□□□ -0.49
TPM3-205ENST00000328159 LHFPL4Q7Z7J7 247 aa12□□□□□ -0.49
TPM3-205ENST00000328159 RXFP4Q8TDU9 374 aa12□□□□□ -0.49
TPM3-205ENST00000328159 METTL1Q9UBP6 276 aaKnown RBP12□□□□□ -0.49
TPM3-205ENST00000328159 HILPDAQ9Y5L2 63 aa12□□□□□ -0.49
TPM3-205ENST00000328159 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms