RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 IGHV2OR16-5A0A0B4J2B6 119 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 YPEL1O60688 119 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 RIGQ13278 110 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 TMEM30BQ3MIR4 351 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 YPEL2Q96QA6 119 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 RNF115Q9Y4L5 304 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 NPIPB11E5RHQ5 1161 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 MORN2Q502X0 79 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 TCF23Q7RTU1 214 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 TNFRSF19Q9NS68 423 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 COLQQ9Y215 455 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-201ENST00000323668 RBFOX2O43251 390 aaKnown RBP eCLIP12.32□□□□□ -0.44
TCOF1-201ENST00000323668 HCP5Q6MZN7 132 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-201ENST00000323668 OCC1Q8TAD7 63 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 AGMATQ9BSE5 352 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 SSBP3Q9BWW4 388 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-201ENST00000323668 MRPL32Q9BYC8 188 aaKnown RBP12.32□□□□□ -0.44
TCOF1-201ENST00000323668 DOCK11Q5JSL3 2073 aa12.32□□□□□ -0.44
TCOF1-201ENST00000323668 NCBP2LA6PVI3 153 aaKnown RBP12.31□□□□□ -0.44
TCOF1-201ENST00000323668 OR9G9P0C7N8 305 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 FOXF2Q12947 444 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 ZNF585BQ52M93 769 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 LURAP1LQ8IV03 231 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 NPIPB3Q92617 1050 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 CYYR1Q96J86 154 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 HEATR1Q9H583 2144 aaKnown RBP12.31□□□□□ -0.44
TCOF1-201ENST00000323668 POLEQ07864 2286 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 SPTBN1Q01082 2364 aaKnown RBP12.31□□□□□ -0.44
TCOF1-201ENST00000323668 NTF4P34130 210 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 C1orf185Q5T7R7 199 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 C11orf42Q8N5U0 333 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 ZNF596Q8TC21 504 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 ATG101Q9BSB4 218 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 WASHC3Q9Y3C0 194 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 NCOA6Q14686 2063 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-201ENST00000323668 OR4C13Q8NGP0 309 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 DIRC2Q96SL1 478 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 SLC25A17O43808 307 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 FAM201AQ5SY85 155 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 MIR17HGQ75NE6 70 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 LINC01551Q86U37 167 aa12.31□□□□□ -0.44
TCOF1-201ENST00000323668 KBTBD11-OT1A0A1B0GTJ5 212 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 THYN1Q9P016 225 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 IGHV3-72A0A0B4J1Y9 119 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 TEX50A0A1B0GTY4 177 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 TCF21O43680 179 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 C19orf35Q6ZS72 473 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 FAM90A1Q86YD7 464 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 RNF138Q8WVD3 245 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 TMEM106BQ9NUM4 274 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 PPP1R14DQ9NXH3 145 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 SERF1AO75920 110 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 IGHV3-48P01763 117 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 GPX4P36969 197 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-201ENST00000323668 TEX38Q6PEX7 206 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 TMEM144Q7Z5S9 345 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 IFI27L2Q9H2X8 130 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 HIGD1AQ9Y241 93 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 SS18L1O75177 396 aaPredicted RBP12.3□□□□□ -0.44
TCOF1-201ENST00000323668 TREML4Q6UXN2 200 aa12.3□□□□□ -0.44
TCOF1-201ENST00000323668 CBY3A6NI87 242 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 CEACAM3P40198 252 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 CA7P43166 264 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 TIMM23BQ5SRD1 257 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 PARD6GQ9BYG4 376 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-201ENST00000323668 HSPB8Q9UJY1 196 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 ZNF785A8K8V0 405 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 GNG7O60262 68 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 SP9P0CG40 484 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 ANOS1P23352 680 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 CTAG1AP78358 180 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 TBL2Q9Y4P3 447 aaKnown RBP12.29□□□□□ -0.44
TCOF1-201ENST00000323668 KIAA1549LQ6ZVL6 1849 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 DPRXA6NFQ7 191 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 ADMP35318 185 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 TMEM105Q8N8V8 129 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 OSR1Q8TAX0 266 aaPredicted RBP12.29□□□□□ -0.44
TCOF1-201ENST00000323668 FAM222BQ8WU58 562 aa12.29□□□□□ -0.44
TCOF1-201ENST00000323668 SIAH2O43255 324 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 STAG3L2P0CL84 134 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 STAG3L3P0CL85 134 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 GATA2P23769 480 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-201ENST00000323668 HINT1P49773 126 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-201ENST00000323668 FOXL1Q12952 345 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 EFNB3Q15768 340 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 SGK494Q96LW2 274 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 PLA2G2EQ9NZK7 142 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 DOCK10Q96BY6 2186 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 FAM90A9PA6NNJ1 464 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 CD3EP07766 207 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 MAS1LP35410 378 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 C9orf106Q8NAJ2 232 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 EAF1Q96JC9 268 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-201ENST00000323668 SPRR3Q9UBC9 169 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 CACNA1HO95180 2353 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 CADP27708 2225 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 PKDREJQ9NTG1 2253 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 C15orf61A6NNL5 157 aa12.28□□□□□ -0.44
TCOF1-201ENST00000323668 CORTO00230 105 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms