RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 C4orf17Q53FE4 359 aa18.26■□□□□ 0.51
PNKP-201ENST00000322344 Q8NA96 180 aa18.26■□□□□ 0.51
PNKP-201ENST00000322344 CHODLQ9H9P2 273 aa18.26■□□□□ 0.51
PNKP-201ENST00000322344 DYSFO75923 2080 aa18.26■□□□□ 0.51
PNKP-201ENST00000322344 TMEM178BH3BS89 294 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 IGKV1-16P04430 117 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 TYMSP04818 313 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 C2orf83Q53S99 150 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 IMMP2LQ96T52 175 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 SSUH2Q9Y2M2 353 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 TEX50A0A1B0GTY4 177 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 SRRM4A7MD48 611 aaKnown RBP18.25■□□□□ 0.51
PNKP-201ENST00000322344 MYOD1P15172 320 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 FAM71F2Q6NXP2 309 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 TMEM144Q7Z5S9 345 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 ELOVL1Q9BW60 279 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 GPR61Q9BZJ8 451 aa18.25■□□□□ 0.51
PNKP-201ENST00000322344 SAA1P0DJI8 122 aaPredicted RBP18.24■□□□□ 0.51
PNKP-201ENST00000322344 LCN2P80188 198 aa18.24■□□□□ 0.51
PNKP-201ENST00000322344 OR1L8Q8NGR8 309 aa18.24■□□□□ 0.51
PNKP-201ENST00000322344 PCGF1Q9BSM1 259 aa18.24■□□□□ 0.51
PNKP-201ENST00000322344 NGBQ9NPG2 151 aa18.24■□□□□ 0.51
PNKP-201ENST00000322344 A0A1W2PPQ1 181 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 IGFBP2P18065 325 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 ASCL5Q7RTU5 278 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 C8orf31Q8N9H6 132 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 MRPL20Q9BYC9 149 aaKnown RBP18.23■□□□□ 0.51
PNKP-201ENST00000322344 ARL2-SNX15V9GYD0 113 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 NDUFB3O43676 98 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 TMEM177Q53S58 311 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 PYY3Q5JQD4 70 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 GFI1BQ5VTD9 330 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 TMEM200BQ69YZ2 307 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 OR5AN1Q8NGI8 311 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 OR10D4PQ8NGN7 298 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 SLC35E1Q96K37 410 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 SEPSECSQ9HD40 501 aaKnown RBP18.23■□□□□ 0.51
PNKP-201ENST00000322344 TMEM106BQ9NUM4 274 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 SLC45A2Q9UMX9 530 aa18.23■□□□□ 0.51
PNKP-201ENST00000322344 SPENQ96T58 3664 aaKnown RBP18.22■□□□□ 0.51
PNKP-201ENST00000322344 LINC00869P0C866 280 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 LRRC10Q5BKY1 277 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 ZNRD1Q9P1U0 126 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 ZFHX4Q86UP3 3567 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 H0YJW9 148 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 TNFRSF13BO14836 293 aaPredicted RBP18.22■□□□□ 0.51
PNKP-201ENST00000322344 CCL3L1P16619 93 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 CHRNA7P36544 502 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 DNLZQ5SXM8 178 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 ZCCHC24Q8N2G6 241 aaKnown RBP18.22■□□□□ 0.51
PNKP-201ENST00000322344 LINC00311Q8N616 119 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 OR5T1Q8NG75 326 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 RND1Q92730 232 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 HARBI1Q96MB7 349 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 DERL1Q9BUN8 251 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 SH3BGRL2Q9UJC5 107 aa18.22■□□□□ 0.51
PNKP-201ENST00000322344 TMEM183AQ8IXX5 376 aa18.21■□□□□ 0.51
PNKP-201ENST00000322344 OR4A5Q8NH83 315 aa18.21■□□□□ 0.51
PNKP-201ENST00000322344 ZNF596Q8TC21 504 aa18.21■□□□□ 0.51
PNKP-201ENST00000322344 UHRF2Q96PU4 802 aa18.21■□□□□ 0.51
PNKP-201ENST00000322344 C19orf24Q9BVV8 132 aa18.21■□□□□ 0.51
PNKP-201ENST00000322344 YTHDF2Q9Y5A9 579 aaKnown RBP18.21■□□□□ 0.51
PNKP-201ENST00000322344 MDFIC2A0A1B0GVS7 189 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 LINC00587B1AMM8 73 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 INS-IGF2F8WCM5 200 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 SPATA31B1PQ5VZV4 182 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 C11orf52Q96A22 123 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 TMEM186Q96B77 213 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 ACY3Q96HD9 319 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 LRFN3Q9BTN0 628 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 FUT9Q9Y231 359 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 DMRT1Q9Y5R6 373 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 SCO2A0A1W2PP80 73 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 RNASE2P10153 161 aaKnown RBP18.2■□□□□ 0.5
PNKP-201ENST00000322344 AREGP15514 252 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 COA6Q5JTJ3 125 aaKnown RBP18.2■□□□□ 0.5
PNKP-201ENST00000322344 ACTL10Q5JWF8 245 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 PDPNQ86YL7 162 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 PNKDQ8N490 385 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 OR4P4Q8NGL7 312 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 VSTM2AQ8TAG5 236 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 CCL17Q92583 94 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 RNASE6Q93091 150 aaKnown RBP18.2■□□□□ 0.5
PNKP-201ENST00000322344 FLYWCH2Q96CP2 140 aaKnown RBP18.2■□□□□ 0.5
PNKP-201ENST00000322344 COMMD5Q9GZQ3 224 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 TMEM167BQ9NRX6 74 aa18.2■□□□□ 0.5
PNKP-201ENST00000322344 IGHV2-70P01814 119 aa18.19■□□□□ 0.5
PNKP-201ENST00000322344 USF1P22415 310 aaPredicted RBP18.19■□□□□ 0.5
PNKP-201ENST00000322344 RBPJQ06330 500 aa18.19■□□□□ 0.5
PNKP-201ENST00000322344 FOXL1Q12952 345 aa18.19■□□□□ 0.5
PNKP-201ENST00000322344 PDZD11Q5EBL8 140 aa18.19■□□□□ 0.5
PNKP-201ENST00000322344 H1FXQ92522 213 aaKnown RBP18.19■□□□□ 0.5
PNKP-201ENST00000322344 SFRP2Q96HF1 295 aa18.19■□□□□ 0.5
PNKP-201ENST00000322344 NABP2Q9BQ15 211 aa18.19■□□□□ 0.5
PNKP-201ENST00000322344 NDUFA4L2Q9NRX3 87 aa18.19■□□□□ 0.5
PNKP-201ENST00000322344 FCN3O75636 299 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 RPL8P62917 257 aaKnown RBP18.18■□□□□ 0.5
PNKP-201ENST00000322344 ERHP84090 104 aaKnown RBP18.18■□□□□ 0.5
PNKP-201ENST00000322344 TBR1Q16650 682 aa18.18■□□□□ 0.5
PNKP-201ENST00000322344 FAM78BQ5VT40 261 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms