RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 A0A1B0GUT8 65 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 ERVK11-1P61568 191 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 PPP1CAP62136 330 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 LINC01559Q495D7 138 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 CHRNA10Q9GZZ6 450 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 ODAMA1E959 279 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 RND2P52198 227 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 C9orf40Q8IXQ3 194 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 TMEM189A5PLL7 270 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF658BQ4V348 819 aaPredicted RBP6.02□□□□□ -1.45
SMC1A-201ENST00000322213 CDPF1Q6NVV7 123 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 LOXL4Q96JB6 756 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 AICDAQ9GZX7 198 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 CLEC1BQ9P126 229 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 SPTBN4Q9H254 2564 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 PKD1L2Q7Z442 2459 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 KRTCAP3Q53RY4 240 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 UNQ5815/PRO19632Q6UWF5 114 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 TM4SF19Q96DZ7 209 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF703Q9H7S9 590 aaPredicted RBP6.02□□□□□ -1.45
SMC1A-201ENST00000322213 C1QTNF9P0C862 333 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 MEOX1P50221 254 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF146Q15072 292 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 JMJD1CQ15652 2540 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 IGHV3-43A0A0B4J1X8 118 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 SHISA7A6NL88 538 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 IGHV3-43DP0DP04 118 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 Q8NFD4 153 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF721Q8TF20 911 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 MRAP2Q96G30 205 aa6.02□□□□□ -1.45
SMC1A-201ENST00000322213 RPP21Q9H633 154 aaKnown RBP6.02□□□□□ -1.45
SMC1A-201ENST00000322213 IGHV2OR16-5A0A0B4J2B6 119 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 AZU1P20160 251 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 TPSD1Q9BZJ3 242 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 TDGF1P13385 188 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 CTGFP29279 349 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 RND1Q92730 232 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 HARBI1Q96MB7 349 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 ATP5LO75964 103 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 LGALS4P56470 323 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 SUPT4H1P63272 117 aaKnown RBP6.01□□□□□ -1.45
SMC1A-201ENST00000322213 TMEM190Q8WZ59 177 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 WFDC1Q9HC57 220 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 HYPMO75409 117 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 SERGEFQ9UGK8 458 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 GZMHP20718 246 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 TFF3Q07654 80 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 UNQ6494/PRO21346Q6UXR6 183 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 R3HDMLQ9H3Y0 253 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 MRPL27Q9P0M9 148 aaKnown RBP6.01□□□□□ -1.45
SMC1A-201ENST00000322213 J3KRW8 73 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 FER1L6-AS1Q8NA97 138 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 LOC101059948A0A1B0GTJ6 334 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 DLL1O00548 723 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 C8orf88P0DMB2 117 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 FER1L6-AS2Q96M78 137 aa6.01□□□□□ -1.45
SMC1A-201ENST00000322213 LRRK2Q5S007 2527 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 MUC21A0A0G2JKD1 596 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 MUC21A0A140T8X8 626 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 CD40P25942 277 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 SLAQ13239 276 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 IL11RAQ14626 422 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 MUC21Q5SSG8 566 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 LINC00114Q6XXX2 140 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 ORMDL3Q8N138 153 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 IGHV5-51A0A0C4DH38 117 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 OR11H12B2RN74 326 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 GABRG2P18507 467 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 TNFRSF1AP19438 455 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 RNFT1Q5M7Z0 435 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 OR11H1Q8NG94 326 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 OR11H2Q8NH07 326 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 RNASE7Q9H1E1 156 aaKnown RBP6□□□□□ -1.45
SMC1A-201ENST00000322213 OSTCQ9NRP0 149 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 CCL2P13500 99 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF562Q6V9R5 426 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 TEX43Q6ZNM6 134 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 RFESDQ8TAC1 157 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 RAXQ9Y2V3 346 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 PROB1E7EW31 1015 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 E9PQ18 207 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 J3QT63 122 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 RBX1P62877 108 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 CTHRC1Q96CG8 243 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 C9JCJ5 164 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 APOHP02749 345 aaPredicted RBP6□□□□□ -1.45
SMC1A-201ENST00000322213 TYMSP04818 313 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 CISD3P0C7P0 127 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 LGALS3P17931 250 aaKnown RBP6□□□□□ -1.45
SMC1A-201ENST00000322213 SFTPA2Q8IWL1 248 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 SFTPA1Q8IWL2 248 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 HS3ST3B1Q9Y662 390 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 DOPEY1Q5JWR5 2465 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 CDKN1AP38936 164 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 TUSC5Q8IXB3 177 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 SPEM1Q8N4L4 309 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 ZNF525Q8N782 197 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 FN1P02751 2386 aaKnown RBP6□□□□□ -1.45
SMC1A-201ENST00000322213 IGKV1D-42A0A075B6H8 117 aa6□□□□□ -1.45
SMC1A-201ENST00000322213 TRAV8-2A0A0B4J237 113 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms