RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DYSFO75923 2080 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 LOC105371267A0A1B0GV96 52 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 HIGD1CA8MV81 97 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 ROS1P08922 2347 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 IZUMO1RA6ND01 250 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 NPIPB4C9JG80 1138 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 LDLRAD4O15165 306 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 GPR6P46095 362 aaPredicted RBP14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 TGIF1Q15583 401 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 CIARTQ8N365 385 aaPredicted RBP14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 LAMTOR2Q9Y2Q5 125 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 EML6Q6ZMW3 1958 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 YBX2Q9Y2T7 364 aaKnown RBP14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 IGHV3-72A0A0B4J1Y9 119 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 CYP2G1PQ6ZSU1 146 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 PRDM13Q9H4Q3 707 aa14.41□□□□□ -0.1
SMCHD1-201ENST00000320876 FAM181AQ8N9Y4 354 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 CLEC7AQ9BXN2 247 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 PIMREGQ9BSJ6 248 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 GLI3P10071 1580 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 NPIPB11E5RHQ5 1161 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 ZNF708P17019 499 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 DNM1P46Q6ZS02 220 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 FAM214BQ7L5A3 538 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 LEPP41159 167 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 FOXA3P55318 350 aaPredicted RBP14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 SDF2L1Q9HCN8 221 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 COL9A1P20849 921 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 PEBP1P30086 187 aaKnown RBP14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 FBLN7Q53RD9 439 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 LILRA6Q6PI73 481 aa14.4□□□□□ -0.1
SMCHD1-201ENST00000320876 CCL21O00585 134 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 IL11P20809 199 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 SLC25A47Q6Q0C1 308 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 A0A0G2JMZ2 1700 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 LRRC37A2A6NM11 1700 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 LRRC37AA6NMS7 1700 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 PRR33A8MZF0 331 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 PAX2Q02962 417 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 PCSK4Q6UW60 755 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 DMRTA2Q96SC8 542 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 MEGF9Q9H1U4 602 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 ST6GALNAC6Q969X2 333 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 TRAV8-4A0A0B4J246 113 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 IFI6P09912 130 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 NDUFAF3Q9BU61 184 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 M0R381 172 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 SFTPCP11686 197 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 PHLDA1Q8WV24 401 aaPredicted RBP14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 TUBA4BQ9H853 241 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 G6PC2Q9NQR9 355 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 ZNF257Q9Y2Q1 563 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 CENPVL1A0A0U1RR11 272 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 H3BUT2 72 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 SNAI2O43623 268 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 STARD6P59095 220 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 IMMP2LQ96T52 175 aa14.39□□□□□ -0.11
SMCHD1-201ENST00000320876 IGHV4-39P01824 125 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 PAX1P15863 534 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 RNF182Q8N6D2 247 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 ZFAND6Q6FIF0 208 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 LOC390937A0A1W2PQ73 354 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 IGHV1-45A0A0A0MS14 117 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 TIMM23BQ5SRD1 257 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 FNDC4Q9H6D8 234 aaPredicted RBP14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 VWA8A3KMH1 1905 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 OR9G1Q8NH87 305 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 GPHA2Q96T91 129 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 RIPPLY2Q5TAB7 128 aa14.38□□□□□ -0.11
SMCHD1-201ENST00000320876 UNQ9370/PRO34162Q6UXP9 181 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 WISP3O95389 354 aaPredicted RBP14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 ZFP36L2P47974 494 aaKnown RBP14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 FAM19A2Q8N3H0 131 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 ASPHD2Q6ICH7 369 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 ITLN1Q8WWA0 313 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 COL6A6A6NMZ7 2263 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 SLC25A2Q9BXI2 301 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 YAE1D1Q9NRH1 226 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 SCO2A0A1W2PP80 73 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 NPIPB13A6NJU9 1138 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 ZSWIM8A7E2V4 1837 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 AHRRA9YTQ3 701 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 RPRMQ9NS64 109 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 IGLV1-36A0A0B4J1U3 117 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 NKX2-8O15522 239 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 TRAV24A0A0B4J272 114 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 MOSP00540 346 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 PLNP26678 52 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 FAM71F2Q6NXP2 309 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 NRTNQ99748 197 aa14.37□□□□□ -0.11
SMCHD1-201ENST00000320876 TNRC6AQ8NDV7 1962 aaKnown RBP14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 CGAP01215 116 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 NBEAP1P0C6P0 100 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 ZNF585BQ52M93 769 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 ABHD12Q8N2K0 398 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 ICAM4Q14773 271 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 DENND4AQ7Z401 1863 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 TSPAN7P41732 249 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 IL6RP08887 468 aaPredicted RBP14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 OR10J3Q5JRS4 329 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms