RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 DEFA5Q01523 94 aa12.17□□□□□ -0.46
PDLIM5-202ENST00000318007 TUSC1Q2TAM9 212 aa12.17□□□□□ -0.46
PDLIM5-202ENST00000318007 PLEKHA3Q9HB20 300 aa12.17□□□□□ -0.46
PDLIM5-202ENST00000318007 TCF21O43680 179 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 PRH1P02810 166 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 HSPE1P61604 102 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 UBA52P62987 128 aaKnown RBP12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 ZNF562Q6V9R5 426 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 SLC35E3Q7Z769 313 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 ZNF429Q86V71 674 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 OR1L8Q8NGR8 309 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 DTD1Q8TEA8 209 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 NEURL2Q9BR09 285 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 HEYLQ9NQ87 328 aaPredicted RBP12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 COA4Q9NYJ1 87 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 HSPB7Q9UBY9 170 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 H0YIZ8 118 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 SYNGR2O43760 224 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 MPC2O95563 127 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 OR13C7P0DN81 318 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 WT1-ASQ06250 92 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 NDUFA4L2Q9NRX3 87 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 FKBP11Q9NYL4 201 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 MBD2Q9UBB5 411 aa12.16□□□□□ -0.46
PDLIM5-202ENST00000318007 FXYD6-FXYD2A0A087WZ82 144 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 TRAV14DV4A0A0A6YYC5 116 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 M0QZK8 103 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 TMEM50AO95807 157 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 FGF2P09038 288 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 TRAPPC2P0DI81 140 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 TRAPPC2BP0DI82 140 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 SLC25A6P12236 298 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 PSMB6P28072 239 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 SPCS3P61009 180 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 CYCSP99999 105 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 PRCDQ00LT1 54 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 ID3Q02535 119 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 IL15RAQ13261 267 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 HIST2H2BDQ6DRA6 164 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 OR5T1Q8NG75 326 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 OR5B3Q8NH48 314 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 NPFFR1Q9GZQ6 430 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 ENY2Q9NPA8 101 aa12.15□□□□□ -0.46
PDLIM5-202ENST00000318007 TEX22C9J3V5 150 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 CRYBA1P05813 215 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 CAV2P51636 162 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 RAP2BP61225 183 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 SPANXN5Q5MJ07 72 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 C16orf82Q7Z2V1 217 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 G3V3Q6 166 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 EGR2P11161 476 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 AP2S1P53680 142 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 TMEM267Q0VDI3 215 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 UNQ5815/PRO19632Q6UWF5 114 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 C10orf99Q6UWK7 81 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 ZNF329Q86UD4 541 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 DCUN1D4Q92564 292 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 ZNF257Q9Y2Q1 563 aa12.14□□□□□ -0.47
PDLIM5-202ENST00000318007 A0A1W2PN81 502 aa12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 L7N2F9 121 aa12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 DEDDO75618 318 aa12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 IFNA10P01566 189 aa12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 RNASE1P07998 156 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 CHRNA7P36544 502 aa12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 NKX2-5P52952 324 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 VAMP2P63027 116 aa12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 ASPHD1Q5U4P2 390 aa12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 TMEM86BQ8N661 226 aa12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 ZNF702PQ9H963 129 aa12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 ZNF355PQ9NSJ1 428 aa12.13□□□□□ -0.47
PDLIM5-202ENST00000318007 IGHV3-21A0A0B4J1V1 117 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 IGLC7A0M8Q6 106 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 MAS1LP35410 378 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 LCNL1Q6ZST4 164 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 OR11H4Q8NGC9 324 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 THAP6Q8TBB0 222 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 RNF126Q9BV68 326 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 PRSS22Q9GZN4 317 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 HIPK2Q9H2X6 1198 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 PSENENQ9NZ42 101 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 FAM24AA6NFZ4 105 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 IGHV3-48P01763 117 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 IGHG2P01859 326 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 RLN2P04090 185 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 DEFA4P12838 97 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 SNCAP37840 140 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 Q6ZSV7 163 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 PINX1Q96BK5 328 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 MS4A10Q96PG2 267 aa12.12□□□□□ -0.47
PDLIM5-202ENST00000318007 BOLA2-SMG1P6H3BVE0 249 aa12.11□□□□□ -0.47
PDLIM5-202ENST00000318007 ARPC5O15511 151 aa12.11□□□□□ -0.47
PDLIM5-202ENST00000318007 VDAC2P45880 294 aaPredicted RBP12.11□□□□□ -0.47
PDLIM5-202ENST00000318007 PAX9P55771 341 aa12.11□□□□□ -0.47
PDLIM5-202ENST00000318007 SRSF4Q08170 494 aaKnown RBP12.11□□□□□ -0.47
PDLIM5-202ENST00000318007 AARDQ4LEZ3 155 aa12.11□□□□□ -0.47
PDLIM5-202ENST00000318007 TMEM217Q8N7C4 229 aa12.11□□□□□ -0.47
PDLIM5-202ENST00000318007 OR52E5Q8NH55 327 aa12.11□□□□□ -0.47
PDLIM5-202ENST00000318007 SGMS2Q8NHU3 365 aa12.11□□□□□ -0.47
PDLIM5-202ENST00000318007 JMJD8Q96S16 334 aa12.11□□□□□ -0.47
PDLIM5-202ENST00000318007 S4R3C0 116 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms