RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 GCM1Q9NP62 436 aa13.48□□□□□ -0.25
CACFD1-202ENST00000316948 COL27A1Q8IZC6 1860 aaPredicted RBP13.47□□□□□ -0.25
CACFD1-202ENST00000316948 M0R1X1 148 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 LAMTOR5O43504 91 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 PROP1O75360 226 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 VDAC2P45880 294 aaPredicted RBP13.47□□□□□ -0.25
CACFD1-202ENST00000316948 WDR73Q6P4I2 378 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 NIT1Q86X76 327 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 BORCS7Q96B45 105 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 PRSS46E5RG02 174 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 BMPR1BO00238 502 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 SMPD2O60906 423 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 CA1P00915 261 aaPredicted RBP13.47□□□□□ -0.25
CACFD1-202ENST00000316948 DUTP33316 252 aaKnown RBP13.47□□□□□ -0.25
CACFD1-202ENST00000316948 PRRX1P54821 245 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 ZNF766Q5HY98 468 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 OR10J3Q5JRS4 329 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 TCTEX1D1Q8N7M0 179 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 C11orf52Q96A22 123 aa13.47□□□□□ -0.25
CACFD1-202ENST00000316948 AHRRA9YTQ3 701 aa13.46□□□□□ -0.25
CACFD1-202ENST00000316948 ACP1P24666 158 aa13.46□□□□□ -0.25
CACFD1-202ENST00000316948 RPL39P5Q59GN2 51 aa13.46□□□□□ -0.25
CACFD1-202ENST00000316948 LEMD1Q68G75 181 aa13.46□□□□□ -0.25
CACFD1-202ENST00000316948 TEPPQ6URK8 271 aa13.46□□□□□ -0.25
CACFD1-202ENST00000316948 FAM122AQ96E09 287 aa13.46□□□□□ -0.25
CACFD1-202ENST00000316948 HINT2Q9BX68 163 aa13.46□□□□□ -0.25
CACFD1-202ENST00000316948 ABI3Q9P2A4 366 aa13.46□□□□□ -0.25
CACFD1-202ENST00000316948 A0A1W2PNU3 283 aaPredicted RBP13.46□□□□□ -0.26
CACFD1-202ENST00000316948 CA2P00918 260 aa13.46□□□□□ -0.26
CACFD1-202ENST00000316948 MT-ND6P03923 174 aa13.46□□□□□ -0.26
CACFD1-202ENST00000316948 ERVK-16P61578 105 aa13.46□□□□□ -0.26
CACFD1-202ENST00000316948 RPL19P84098 196 aaKnown RBP13.46□□□□□ -0.26
CACFD1-202ENST00000316948 GCNT2Q8N0V5 402 aa13.46□□□□□ -0.26
CACFD1-202ENST00000316948 TSKUQ8WUA8 353 aa13.46□□□□□ -0.26
CACFD1-202ENST00000316948 NANOS1Q8WY41 292 aaKnown RBP13.46□□□□□ -0.26
CACFD1-202ENST00000316948 CDX2Q99626 313 aaPredicted RBP13.46□□□□□ -0.26
CACFD1-202ENST00000316948 GNG12Q9UBI6 72 aa13.46□□□□□ -0.26
CACFD1-202ENST00000316948 IGFBP2P18065 325 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 TIGITQ495A1 244 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 WDR31Q8NA23 367 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 NHLRC2Q8NBF2 726 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 FAM216AQ8WUB2 273 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 SPRY4Q9C004 299 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 CDC42EP3Q9UKI2 254 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 LSM4Q9Y4Z0 139 aaKnown RBP13.45□□□□□ -0.26
CACFD1-202ENST00000316948 EP300Q09472 2414 aaPredicted RBP13.45□□□□□ -0.26
CACFD1-202ENST00000316948 TTC28Q96AY4 2481 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 KLHDC1Q8N7A1 406 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 ORAOV1Q8WV07 137 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 COLQQ9Y215 455 aaPredicted RBP13.45□□□□□ -0.26
CACFD1-202ENST00000316948 TCF19Q9Y242 345 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 LY96Q9Y6Y9 160 aa13.45□□□□□ -0.26
CACFD1-202ENST00000316948 SPINT2O43291 252 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 TSPOP30536 169 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 MPV17P39210 176 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 RBX1P62877 108 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 CLEC7AQ9BXN2 247 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 SLC35D1Q9NTN3 355 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 TMEM140Q9NV12 185 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 WISP2O76076 250 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 APCSP02743 223 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 OR10J4P0C629 311 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 RELBQ01201 579 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 STUMQ69YW2 141 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 FZR1Q9UM11 496 aa13.44□□□□□ -0.26
CACFD1-202ENST00000316948 SAA2-SAA4A0A096LPE2 208 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 OR7C2O60412 319 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 LYZL6O75951 148 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 AMY1AP04745 511 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 SP1P08047 785 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 TMPRSS3P57727 454 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 RAB31Q13636 194 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 UBALD2Q8IYN6 164 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 ZNF439Q8NDP4 499 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 SSBP3Q9BWW4 388 aaPredicted RBP13.43□□□□□ -0.26
CACFD1-202ENST00000316948 IL19Q9UHD0 177 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 MGAQ8IWI9 3026 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 NKX6-3A6NJ46 265 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 MYOD1P15172 320 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 GATA2P23769 480 aaPredicted RBP13.43□□□□□ -0.26
CACFD1-202ENST00000316948 MRPL49Q13405 166 aaKnown RBP13.43□□□□□ -0.26
CACFD1-202ENST00000316948 Q56UQ5 140 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 PRR31Q5SQ13 230 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 IBA57Q5T440 356 aaKnown RBP13.43□□□□□ -0.26
CACFD1-202ENST00000316948 ACP7Q6ZNF0 438 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 ERASQ7Z444 233 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 C22orf15Q8WYQ4 148 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 HES4Q9HCC6 221 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 HCFC1P51610 2035 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 USF1P22415 310 aaPredicted RBP13.43□□□□□ -0.26
CACFD1-202ENST00000316948 SLAQ13239 276 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 ANKRD39Q53RE8 183 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 C11orf53Q8IXP5 236 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 ZPBPQ9BS86 351 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 BET1LQ9NYM9 111 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 SPRR3Q9UBC9 169 aa13.43□□□□□ -0.26
CACFD1-202ENST00000316948 NPY1RP25929 384 aa13.42□□□□□ -0.26
CACFD1-202ENST00000316948 KLF3P57682 345 aaPredicted RBP13.42□□□□□ -0.26
CACFD1-202ENST00000316948 RNFT1Q5M7Z0 435 aa13.42□□□□□ -0.26
CACFD1-202ENST00000316948 PLEKHA3Q9HB20 300 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms