RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 HIST1H2BHQ93079 126 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST1H2BNQ99877 126 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 HIST1H2BMQ99879 126 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 IL18BPO95998 194 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 RPL11P62913 178 aaKnown RBP7.5□□□□□ -1.21
COL6A5-202ENST00000312481 TMEM42Q69YG0 159 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 DNASE2O00115 360 aaPredicted RBP7.5□□□□□ -1.21
COL6A5-202ENST00000312481 TNFSF13O75888 250 aa7.5□□□□□ -1.21
COL6A5-202ENST00000312481 CMC4P56277 68 aaPredicted RBP7.5□□□□□ -1.21
COL6A5-202ENST00000312481 PPIAL4EA0A075B759 164 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 PPIAL4DF5H284 164 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 PPIAL4FP0DN26 164 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 LTC4SQ16873 150 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 TSPO2Q5TGU0 170 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 OTORQ9NRC9 128 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 PPIAL4AQ9Y536 164 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 UPK2O00526 184 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 CAMPP49913 170 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 GUSBP11Q6P575 273 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 RGP1Q92546 391 aaPredicted RBP7.49□□□□□ -1.21
COL6A5-202ENST00000312481 RNF126Q9BV68 326 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 SOX8P57073 446 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 TMEM177Q53S58 311 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 PLAC9Q5JTB6 97 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 OTPQ5XKR4 325 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 OR11H12B2RN74 326 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 C1orf194Q5T5A4 169 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 OR11H1Q8NG94 326 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 OR11H2Q8NH07 326 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 WDR87Q6ZQQ6 2873 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 ZNF324O75467 553 aaPredicted RBP7.49□□□□□ -1.21
COL6A5-202ENST00000312481 NAPSAO96009 420 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 WDR25Q64LD2 544 aaPredicted RBP7.49□□□□□ -1.21
COL6A5-202ENST00000312481 ALKBH7Q9BT30 221 aaPredicted RBP7.49□□□□□ -1.21
COL6A5-202ENST00000312481 MS4A7Q9GZW8 240 aaPredicted RBP7.49□□□□□ -1.21
COL6A5-202ENST00000312481 CHCHD2Q9Y6H1 151 aaPredicted RBP7.49□□□□□ -1.21
COL6A5-202ENST00000312481 CENPWQ5EE01 88 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 CLEC7AQ9BXN2 247 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 TMEM92Q6UXU6 159 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 SH3BGRL2Q9UJC5 107 aa7.49□□□□□ -1.21
COL6A5-202ENST00000312481 C22orf46C9J442 243 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 H0Y8G0 127 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 CA1P00915 261 aaPredicted RBP7.48□□□□□ -1.21
COL6A5-202ENST00000312481 LYZP61626 148 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 TUSC5Q8IXB3 177 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 TTTY12Q9BZ98 90 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 G3V3Y1 287 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 F2RL2O00254 374 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 ZNF600Q6ZNG1 722 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 CRIPAKQ8N1N5 446 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 WNT5BQ9H1J7 359 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 TRAV14DV4A0A0A6YYC5 116 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 TMEM11P17152 192 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 ACP7Q6ZNF0 438 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 RPP21Q9H633 154 aaKnown RBP7.48□□□□□ -1.21
COL6A5-202ENST00000312481 YAE1D1Q9NRH1 226 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 GLI4P10075 376 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 COX6A1P12074 109 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 FOXL2NBQ6ZUU3 175 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 A0A0J9YW62 118 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 PLNP26678 52 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 C1orf185Q5T7R7 199 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 MDP1Q86V88 176 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 REG4Q9BYZ8 158 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 IGHV1-69-2A0A0G2JMI3 117 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 H3BRM9 83 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 SPANXN1Q5VSR9 72 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 PTPN13Q12923 2485 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 PEX7O00628 323 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 CCL3P10147 92 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 HSD52Q0P140 79 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 C9orf152Q5JTZ5 239 aa7.48□□□□□ -1.21
COL6A5-202ENST00000312481 IL4P05112 153 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 ACTL10Q5JWF8 245 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 PRRC2AP48634 2157 aaKnown RBP7.47□□□□□ -1.21
COL6A5-202ENST00000312481 KBTBD11-OT1A0A1B0GTJ5 212 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 SPINT1O43278 529 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 ICAM4Q14773 271 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 ZAR1Q86SH2 424 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 NEU4Q8WWR8 484 aaPredicted RBP7.47□□□□□ -1.21
COL6A5-202ENST00000312481 C20orf144Q9BQM9 153 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 TMPRSS3P57727 454 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 WFDC8Q8IUA0 241 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 ZNF488Q96MN9 340 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 NABP2Q9BQ15 211 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 CBLN4Q9NTU7 201 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 COLCA2A8K830 154 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 ZNF818PQ6ZRF7 136 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 ZNF525Q8N782 197 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 TSKUQ8WUA8 353 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 PHLDA3Q9Y5J5 127 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 IGHV3-15A0A0B4J1V0 119 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 TIMP3P35625 211 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 PSMB2P49721 201 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 SNRPD3P62318 126 aaKnown RBP7.47□□□□□ -1.21
COL6A5-202ENST00000312481 MBNL2Q5VZF2 373 aaKnown RBP7.47□□□□□ -1.21
COL6A5-202ENST00000312481 MUC15Q8N387 334 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 C11orf42Q8N5U0 333 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 DUSP2Q05923 314 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 IMMP1LQ96LU5 166 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms