RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 NABP2Q9BQ15 211 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 WFDC6Q9BQY6 131 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 SS18L1O75177 396 aaPredicted RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 LOXL3P58215 753 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 ZP4Q12836 540 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 C20orf204Q6ZNR8 217 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 CYP2G1PQ6ZSU1 146 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 GOLT1AQ6ZVE7 132 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 TCF23Q7RTU1 214 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 CLDND2Q8NHS1 167 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 MARS2Q96GW9 593 aaKnown RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 ZNF703Q9H7S9 590 aaPredicted RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 SLC25A10Q9UBX3 287 aaPredicted RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 PCM1Q15154 2024 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 SCO2A0A1W2PP80 73 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 C17orf51A8MQB3 221 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 B9A039 149 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 RPL31P62899 125 aaKnown RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 MDP1Q86V88 176 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 SHISA5Q8N114 240 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 ABHD12Q8N2K0 398 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 OR51G1Q8NGK1 321 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 TDRD6O60522 2096 aaKnown RBP6.95□□□□□ -1.3
VPS41-202ENST00000310301 TECTAO75443 2155 aa6.95□□□□□ -1.3
VPS41-202ENST00000310301 A0A1W2PRS3 328 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 NDUFS6O75380 124 aaKnown RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 NUTF2P61970 127 aaKnown RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 RPL8P62917 257 aaKnown RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 KCNMB1Q16558 191 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 ZNHIT1O43257 154 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST1H2BKO60814 126 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST1H2BJP06899 126 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST1H2BOP23527 126 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST1H2BBP33778 126 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST1H2BDP58876 126 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST1H2BCP62807 126 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST2H2BEQ16778 126 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 BMPERQ8N8U9 685 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 TMEM52Q8NDY8 209 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST1H2BHQ93079 126 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 SIGLEC12Q96PQ1 595 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 METTL26Q96S19 204 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST1H2BNQ99877 126 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HIST1H2BMQ99879 126 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 MRPL32Q9BYC8 188 aaKnown RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 NHP2Q9NX24 153 aaKnown RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 TRAV14DV4A0A0A6YYC5 116 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 IGHV3-72A0A0B4J1Y9 119 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 LOC390937A0A1W2PQ73 354 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 RNF222A6NCQ9 220 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 WISP3O95389 354 aaPredicted RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 PSG4Q00888 419 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 SFTA2Q6UW10 78 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 HEXA-AS1Q9H8Q6 139 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 TMEM56-RWDD3S4R434 201 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 ZFHX2Q9C0A1 2572 aaPredicted RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 MARCH11A6NNE9 402 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 NDUFA3O95167 84 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 CA7P43166 264 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 ACSF3Q4G176 576 aaPredicted RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 SP5Q6BEB4 398 aaPredicted RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 EBLN2Q6P2I7 272 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 NEU4Q8WWR8 484 aaPredicted RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 C19orf24Q9BVV8 132 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 C11orf68Q9H3H3 251 aaKnown RBP6.94□□□□□ -1.3
VPS41-202ENST00000310301 TMEM106BQ9NUM4 274 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 DLEU1O43261 78 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 DYNLRB2Q8TF09 96 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 KIR2DL4Q99706 377 aa6.94□□□□□ -1.3
VPS41-202ENST00000310301 A0A087WV48 116 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 HSPE1P61604 102 aaKnown RBP6.93□□□□□ -1.3
VPS41-202ENST00000310301 NPCDR1Q9BY65 106 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 A0A0J9YW62 118 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 IGHV4-39P01824 125 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 ATP5G3P48201 142 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 TIMM23BQ5SRD1 257 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM27BQ5VT28 67 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 TRAV8-4A0A0B4J246 113 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 SMAD7O15105 426 aaKnown RBP6.93□□□□□ -1.3
VPS41-202ENST00000310301 CGAP01215 116 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 IL6RP08887 468 aaPredicted RBP6.93□□□□□ -1.3
VPS41-202ENST00000310301 IGFL3Q6UXB1 125 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 LURAP1LQ8IV03 231 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 VKORC1L1Q8N0U8 176 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A10PA6NDY2 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A18PA6NE21 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A16PA6NEW6 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A20PA6NIJ5 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A8PA6NJQ4 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A7PA6NKC0 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A22PA8MWA6 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A12PA8MX19 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A5PA8MXJ8 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A23PA8MXZ1 464 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 MGST3O14880 152 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 REG1AP05451 166 aa6.93□□□□□ -1.3
VPS41-202ENST00000310301 FAM90A15PP0C7V4 464 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms