RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 VSIRQ9H7M9 311 aa10.71□□□□□ -0.69
USP38-201ENST00000307017 SYNGR3O43761 229 aa10.71□□□□□ -0.7
USP38-201ENST00000307017 SERF2P84101 59 aa10.71□□□□□ -0.7
USP38-201ENST00000307017 CYP2G1PQ6ZSU1 146 aa10.71□□□□□ -0.7
USP38-201ENST00000307017 TMEM106BQ9NUM4 274 aa10.71□□□□□ -0.7
USP38-201ENST00000307017 TCF19Q9Y242 345 aa10.71□□□□□ -0.7
USP38-201ENST00000307017 LOC105371242A0A075B767 164 aa10.71□□□□□ -0.7
USP38-201ENST00000307017 TSPAN7P41732 249 aa10.71□□□□□ -0.7
USP38-201ENST00000307017 FAM27E3Q08E93 113 aa10.71□□□□□ -0.7
USP38-201ENST00000307017 BMPERQ8N8U9 685 aa10.71□□□□□ -0.7
USP38-201ENST00000307017 C19orf67A6NJJ6 358 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 PYYP10082 97 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 TNFSF10P50591 281 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 YLPM1P49750 1951 aaKnown RBP10.7□□□□□ -0.7
USP38-201ENST00000307017 COL4A1P02462 1669 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 HIGD1CA8MV81 97 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 FOXH1O75593 365 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 FOXL1Q12952 345 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 SDHCQ99643 169 aaPredicted RBP10.7□□□□□ -0.7
USP38-201ENST00000307017 VGLL1Q99990 258 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 IGFL4Q6B9Z1 124 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 SCARF2Q96GP6 870 aaPredicted RBP10.7□□□□□ -0.7
USP38-201ENST00000307017 SIGLEC12Q96PQ1 595 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 C10orf128Q5T292 105 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 TEX45Q8NA69 505 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 POC1AQ8NBT0 407 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 KCNK17Q96T54 332 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 LINC01587Q99440 93 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 IGLV1-36A0A0B4J1U3 117 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 VAX1Q5SQQ9 334 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 NFAM1Q8NET5 270 aaPredicted RBP10.7□□□□□ -0.7
USP38-201ENST00000307017 TNFRSF18Q9Y5U5 241 aa10.7□□□□□ -0.7
USP38-201ENST00000307017 PCOLCEQ15113 449 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 LDLRAD2Q5SZI1 272 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 ZNF501Q96CX3 271 aaPredicted RBP10.69□□□□□ -0.7
USP38-201ENST00000307017 FAM216BQ8N7L0 139 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 RCC1LQ96I51 464 aaKnown RBP10.69□□□□□ -0.7
USP38-201ENST00000307017 KIR2DL4Q99706 377 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 PAX2Q02962 417 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 LINC00596Q86U02 117 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 RAX2Q96IS3 184 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 C19orf24Q9BVV8 132 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 PEF1Q9UBV8 284 aaKnown RBP10.69□□□□□ -0.7
USP38-201ENST00000307017 TRAV5A0A0B4J249 113 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 NDUFS6O75380 124 aaKnown RBP10.69□□□□□ -0.7
USP38-201ENST00000307017 PSG9Q00887 426 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 DUSP15Q9H1R2 295 aaPredicted RBP10.69□□□□□ -0.7
USP38-201ENST00000307017 TRBV5-5A0A0J9YX44 114 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 LAIR2Q6ISS4 152 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 SLC25A47Q6Q0C1 308 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 ANAPC13Q9BS18 74 aa10.69□□□□□ -0.7
USP38-201ENST00000307017 NPPCP23582 126 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 MTURNQ8N3F0 131 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 ZNF48Q96MX3 618 aaPredicted RBP10.68□□□□□ -0.7
USP38-201ENST00000307017 MESP1Q9BRJ9 268 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 ATP5J2P56134 94 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 EPOPA6NHQ4 379 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 NCR2O95944 276 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 SF3B6Q9Y3B4 125 aaKnown RBP10.68□□□□□ -0.7
USP38-201ENST00000307017 MGST3O14880 152 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 C10orf35Q96D05 121 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 TBR1Q16650 682 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 TRAV14DV4A0A0A6YYC5 116 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 LNP1A1A4G5 178 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 CDKN1AP38936 164 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 HIST1H4AP62805 103 aaKnown RBP10.68□□□□□ -0.7
USP38-201ENST00000307017 NSUN5P1Q3KNT7 163 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 FAM27BQ5VT28 67 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 FAM214BQ7L5A3 538 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 Q9H3A6 140 aa10.68□□□□□ -0.7
USP38-201ENST00000307017 PET117Q6UWS5 81 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 SLC25A45Q8N413 288 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 LRP5O75197 1615 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 ZNF236Q9UL36 1845 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 WDYHV1Q96HA8 205 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 RTBDNQ9BSG5 229 aaPredicted RBP10.67□□□□□ -0.7
USP38-201ENST00000307017 MALP21145 153 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 RPL32P62910 135 aaKnown RBP10.67□□□□□ -0.7
USP38-201ENST00000307017 LAMTOR1Q6IAA8 161 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 CDC42EP3Q9UKI2 254 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 ESPL1Q14674 2120 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 IGHV3-53P01767 116 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 CD7P09564 240 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 CCL20P78556 96 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 ZNF658BQ4V348 819 aaPredicted RBP10.67□□□□□ -0.7
USP38-201ENST00000307017 Q96M66 194 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 IL36BQ9NZH7 164 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 TMEM50AO95807 157 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 CCL3L1P16619 93 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 ZNF415Q09FC8 603 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 GTSCR1Q86UQ5 136 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 FDCSPQ8NFU4 85 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 MRPL20Q9BYC9 149 aaKnown RBP10.67□□□□□ -0.7
USP38-201ENST00000307017 PRDM13Q9H4Q3 707 aa10.67□□□□□ -0.7
USP38-201ENST00000307017 NXT2Q9NPJ8 142 aaKnown RBP10.67□□□□□ -0.7
USP38-201ENST00000307017 hDV102S1A0JD36 115 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 OR11H12B2RN74 326 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 HSPE1P61604 102 aaKnown RBP10.66□□□□□ -0.7
USP38-201ENST00000307017 OR11H1Q8NG94 326 aa10.66□□□□□ -0.7
USP38-201ENST00000307017 OR11H2Q8NH07 326 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms