RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ZCCHC24Q8N2G6 241 aaKnown RBP10.61□□□□□ -0.71
HIF3A-204ENST00000300862 OR2T10Q8NGZ9 312 aa10.61□□□□□ -0.71
HIF3A-204ENST00000300862 DDB2Q92466 427 aa10.61□□□□□ -0.71
HIF3A-204ENST00000300862 GCM1Q9NP62 436 aa10.61□□□□□ -0.71
HIF3A-204ENST00000300862 POLR3KQ9Y2Y1 108 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-204ENST00000300862 DSCAML1Q8TD84 2053 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 KIR2DL5BA0A0G2JN68 375 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 KIR2DL5BA0A0G2JPC4 375 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 CEACAM4O75871 244 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 TNFAIP6P98066 277 aaPredicted RBP10.6□□□□□ -0.71
HIF3A-204ENST00000300862 SPATA31B1PQ5VZV4 182 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 OR4A47Q6IF82 309 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 TCF23Q7RTU1 214 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 KIR2DL5AQ8N109 375 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 FAM169BQ8N8A8 192 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 DIRC2Q96SL1 478 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 ZNF318Q5VUA4 2279 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 KBTBD11-OT1A0A1B0GTJ5 212 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 IGHV1-46P01743 117 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 C1QTNF9P0C862 333 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 MRPS11P82912 194 aaKnown RBP10.6□□□□□ -0.71
HIF3A-204ENST00000300862 ARSJQ5FYB0 599 aaPredicted RBP10.6□□□□□ -0.71
HIF3A-204ENST00000300862 OR4S2Q8NH73 311 aa10.6□□□□□ -0.71
HIF3A-204ENST00000300862 RBFOX2O43251 390 aaKnown RBP eCLIP10.59□□□□□ -0.71
HIF3A-204ENST00000300862 CCKARP32238 428 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 TDGF1P3P51864 188 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 CNN1P51911 297 aaKnown RBP10.59□□□□□ -0.71
HIF3A-204ENST00000300862 ERVFC1-1P60608 527 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 LINC01551Q86U37 167 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 C1orf174Q8IYL3 243 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 CISD2Q8N5K1 135 aaKnown RBP10.59□□□□□ -0.71
HIF3A-204ENST00000300862 ANAPC16Q96DE5 110 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 SEPSECSQ9HD40 501 aaKnown RBP10.59□□□□□ -0.71
HIF3A-204ENST00000300862 BSNQ9UPA5 3926 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 TRGV10A0A0A0MS01 117 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 RAB4AP20338 218 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 IL3RAP26951 378 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 OPRK1P41145 380 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 CCL8P80075 99 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 FAM78BQ5VT40 261 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 MOB3BQ86TA1 216 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 OR52E5Q8NH55 327 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 FKBP11Q9NYL4 201 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 RNF7Q9UBF6 113 aa10.59□□□□□ -0.71
HIF3A-204ENST00000300862 APC2O95996 2303 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 TRBV20OR9-2A0A075B6H5 130 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 IGLV3-9A0A075B6K5 115 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 C15orf61A6NNL5 157 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 M0R143 59 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 FOXH1O75593 365 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 CA2P00918 260 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 IGKV1-16P04430 117 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 SRP14P37108 136 aaKnown RBP10.58□□□□□ -0.72
HIF3A-204ENST00000300862 RPL15P61313 204 aaKnown RBP10.58□□□□□ -0.72
HIF3A-204ENST00000300862 C1orf194Q5T5A4 169 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 C1orf185Q5T7R7 199 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 TMEM256Q8N2U0 113 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 RAI1Q7Z5J4 1906 aaPredicted RBP10.58□□□□□ -0.72
HIF3A-204ENST00000300862 SCO2A0A1W2PP80 73 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 FAM90A9PA6NNJ1 464 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 TM4SF5O14894 197 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 NUPR1O60356 82 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 SCGB1D1O95968 90 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 IL6RP08887 468 aaPredicted RBP10.58□□□□□ -0.72
HIF3A-204ENST00000300862 NPY1RP25929 384 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 STUMQ69YW2 141 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 SLC24A4Q8NFF2 622 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 ZCCHC14Q8WYQ9 949 aaKnown RBP10.58□□□□□ -0.72
HIF3A-204ENST00000300862 RND1Q92730 232 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 GAFA1Q96PS6 74 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 DYSFO75923 2080 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 POLEQ07864 2286 aa10.58□□□□□ -0.72
HIF3A-204ENST00000300862 A0A0U1RQK1 487 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 ACTL6BO94805 426 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 RAB7AP51149 207 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 RBMXL3Q8N7X1 1067 aaKnown RBP10.57□□□□□ -0.72
HIF3A-204ENST00000300862 IDI2-AS1Q9NZ38 188 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 YTHDF2Q9Y5A9 579 aaKnown RBP10.57□□□□□ -0.72
HIF3A-204ENST00000300862 TANC2Q9HCD6 1990 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 SRRM4A7MD48 611 aaKnown RBP10.57□□□□□ -0.72
HIF3A-204ENST00000300862 PDE6DO43924 150 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 MPDU1O75352 247 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 STPG3Q8N7X2 389 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 NPVFQ9HCQ7 196 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 TMEM14BQ9NUH8 114 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 NAGKQ9UJ70 344 aa10.57□□□□□ -0.72
HIF3A-204ENST00000300862 TMPRSS2O15393 492 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 VENTXO95231 258 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 STAG3L2P0CL84 134 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 STAG3L3P0CL85 134 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 ZNF25P17030 456 aaPredicted RBP10.56□□□□□ -0.72
HIF3A-204ENST00000300862 IGFBP2P18065 325 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 CD40P25942 277 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 SELENOVP59797 346 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 HSPE1P61604 102 aaKnown RBP10.56□□□□□ -0.72
HIF3A-204ENST00000300862 EFNB3Q15768 340 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 SAPCD1Q5SSQ6 148 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 Q6ZS92 163 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 TMEM144Q7Z5S9 345 aa10.56□□□□□ -0.72
HIF3A-204ENST00000300862 RAB1CQ92928 201 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms