RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 M0R143 59 aa13.83□□□□□ -0.2
CHRNE-201ENST00000293780 SCGB1D1O95968 90 aa13.83□□□□□ -0.2
CHRNE-201ENST00000293780 FRMD6-AS1P0C7T7 363 aa13.83□□□□□ -0.2
CHRNE-201ENST00000293780 ERVFC1-1P60608 527 aa13.83□□□□□ -0.2
CHRNE-201ENST00000293780 HSPE1P61604 102 aaKnown RBP13.83□□□□□ -0.2
CHRNE-201ENST00000293780 LYG1Q8N1E2 194 aa13.83□□□□□ -0.2
CHRNE-201ENST00000293780 RBM14Q96PK6 669 aaKnown RBP13.83□□□□□ -0.2
CHRNE-201ENST00000293780 TXNDC17Q9BRA2 123 aa13.83□□□□□ -0.2
CHRNE-201ENST00000293780 TMEM14BQ9NUH8 114 aa13.83□□□□□ -0.2
CHRNE-201ENST00000293780 YLPM1P49750 1951 aaKnown RBP13.82□□□□□ -0.2
CHRNE-201ENST00000293780 DSCAML1Q8TD84 2053 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 CD33P20138 364 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 CBLN1P23435 193 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 CFHR2P36980 270 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 KIR2DS2P43631 304 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 GNG10P50151 68 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 IGFL2Q6UWQ7 119 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 MIR17HGQ75NE6 70 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 DEFB108BQ8NET1 73 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 LRFN3Q9BTN0 628 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 ZNRD1Q9P1U0 126 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 RHOBP62745 196 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 FKBP11Q9NYL4 201 aa13.82□□□□□ -0.2
CHRNE-201ENST00000293780 FOXA2Q9Y261 457 aaPredicted RBP13.82□□□□□ -0.2
CHRNE-201ENST00000293780 MMP23AO75900 390 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 MRPS11P82912 194 aaKnown RBP13.81□□□□□ -0.2
CHRNE-201ENST00000293780 ZNF90Q03938 601 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 OR5I1Q13606 314 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 RPRMLQ8N4K4 120 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 ENY2Q9NPA8 101 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 KBTBD11-OT1A0A1B0GTJ5 212 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 ZNF25P17030 456 aaPredicted RBP13.81□□□□□ -0.2
CHRNE-201ENST00000293780 RAB7AP51149 207 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 TDGF1P3P51864 188 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 YPEL3P61236 119 aaPredicted RBP13.81□□□□□ -0.2
CHRNE-201ENST00000293780 ZNF474Q6S9Z5 364 aaPredicted RBP13.81□□□□□ -0.2
CHRNE-201ENST00000293780 TP53TG3Q9ULZ0 132 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 OR51B2Q9Y5P1 312 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 OTOGLQ3ZCN5 2332 aa13.81□□□□□ -0.2
CHRNE-201ENST00000293780 EP300Q09472 2414 aaPredicted RBP13.8□□□□□ -0.2
CHRNE-201ENST00000293780 LINC00869P0C866 280 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 GATA2P23769 480 aaPredicted RBP13.8□□□□□ -0.2
CHRNE-201ENST00000293780 RPL29P47914 159 aaKnown RBP13.8□□□□□ -0.2
CHRNE-201ENST00000293780 POLR3KQ9Y2Y1 108 aaPredicted RBP13.8□□□□□ -0.2
CHRNE-201ENST00000293780 PLCE1Q9P212 2302 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 KLF3P57682 345 aaPredicted RBP13.8□□□□□ -0.2
CHRNE-201ENST00000293780 PRR20EP86478 221 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 PRR20CP86479 221 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 PRR20DP86480 221 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 PRR20BP86481 221 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 PRR20AP86496 221 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 MLANAQ16655 118 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 DEFB109BQ30KR1 87 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 C1orf194Q5T5A4 169 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 FAM216AQ8WUB2 273 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 ZCCHC14Q8WYQ9 949 aaKnown RBP13.8□□□□□ -0.2
CHRNE-201ENST00000293780 SNRNP40Q96DI7 357 aaKnown RBP13.8□□□□□ -0.2
CHRNE-201ENST00000293780 BTF3L4Q96K17 158 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 IL36BQ9NZH7 164 aa13.8□□□□□ -0.2
CHRNE-201ENST00000293780 SRRM4A7MD48 611 aaKnown RBP13.79□□□□□ -0.2
CHRNE-201ENST00000293780 C1orf174Q8IYL3 243 aa13.79□□□□□ -0.2
CHRNE-201ENST00000293780 NEUROG1Q92886 237 aa13.79□□□□□ -0.2
CHRNE-201ENST00000293780 MS4A10Q96PG2 267 aa13.79□□□□□ -0.2
CHRNE-201ENST00000293780 IGKV1-16P04430 117 aa13.79□□□□□ -0.2
CHRNE-201ENST00000293780 RAB4AP20338 218 aa13.79□□□□□ -0.2
CHRNE-201ENST00000293780 EAF1Q96JC9 268 aaPredicted RBP13.79□□□□□ -0.2
CHRNE-201ENST00000293780 CCL13Q99616 98 aa13.79□□□□□ -0.2
CHRNE-201ENST00000293780 TANC2Q9HCD6 1990 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 IGKV1OR2-108A0A075B7D4 117 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 SPAARA0A1B0GVQ0 90 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 J3QR06 171 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 GLRXP35754 106 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 LINC00310P59036 64 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 RAB31Q13636 194 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 PSG5Q15238 335 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 KRTCAP3Q53RY4 240 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 MRPL18Q9H0U6 180 aaKnown RBP13.78□□□□□ -0.2
CHRNE-201ENST00000293780 TRGV10A0A0A0MS01 117 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 KIR2DL5BA0A0G2JN68 375 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 KIR2DL5BA0A0G2JPC4 375 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 ITGB1BP1O14713 200 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 CRYBB3P26998 211 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 C22orf34Q6ZV56 151 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 KIR2DL5AQ8N109 375 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 FAM169BQ8N8A8 192 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 ZNF439Q8NDP4 499 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 CMTM2Q8TAZ6 248 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 C11orf52Q96A22 123 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 GCM1Q9NP62 436 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 ASCL3Q9NQ33 180 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 NAGKQ9UJ70 344 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 SLC45A2Q9UMX9 530 aa13.78□□□□□ -0.2
CHRNE-201ENST00000293780 RAI1Q7Z5J4 1906 aaPredicted RBP13.77□□□□□ -0.2
CHRNE-201ENST00000293780 ARFGEF3Q5TH69 2177 aa13.77□□□□□ -0.2
CHRNE-201ENST00000293780 RP1L1Q8IWN7 2480 aaPredicted RBP13.77□□□□□ -0.2
CHRNE-201ENST00000293780 F2Z2F3 143 aa13.77□□□□□ -0.21
CHRNE-201ENST00000293780 FAM216BQ8N7L0 139 aa13.77□□□□□ -0.21
CHRNE-201ENST00000293780 DEFB124Q8NES8 71 aa13.77□□□□□ -0.21
CHRNE-201ENST00000293780 NABP2Q9BQ15 211 aa13.77□□□□□ -0.21
CHRNE-201ENST00000293780 MBD3L4A6NDZ8 208 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms