RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 PRDM14Q9GZV8 571 aa10.04□□□□□ -0.8
SYNGAP1-201ENST00000293748 RND2P52198 227 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 CRYBA2P53672 197 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 UCP2P55851 309 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 ATOH7Q8N100 152 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 SHISA5Q8N114 240 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 MIEN1Q9BRT3 115 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 MRPS18CQ9Y3D5 142 aaKnown RBP10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 PPIAL4EA0A075B759 164 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 A0A1B0GTI1 187 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 ODAMA1E959 279 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 PPIAL4DF5H284 164 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 ZNF324O75467 553 aaPredicted RBP10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 PPIAL4FP0DN26 164 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 GNLYP22749 145 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 HBBP68871 147 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 TMEM30BQ3MIR4 351 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 C2orf83Q53S99 150 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 CENPWQ5EE01 88 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 NABP2Q9BQ15 211 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 IL36BQ9NZH7 164 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 PPIAL4AQ9Y536 164 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 IGHV3OR15-7A0A075B7D8 119 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 CRXO43186 299 aaPredicted RBP10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 UCP1P25874 307 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 ADIPOQQ15848 244 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 OR4A5Q8NH83 315 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 SRSF12Q8WXF0 261 aaKnown RBP10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 ZNF714Q96N38 554 aa10.03□□□□□ -0.8
SYNGAP1-201ENST00000293748 A0A1W2PRD5 423 aa10.02□□□□□ -0.8
SYNGAP1-201ENST00000293748 A0A1W2PRF3 423 aa10.02□□□□□ -0.8
SYNGAP1-201ENST00000293748 A0A1W2PRM7 423 aa10.02□□□□□ -0.8
SYNGAP1-201ENST00000293748 BTCP35070 178 aa10.02□□□□□ -0.8
SYNGAP1-201ENST00000293748 JOSD1Q15040 202 aaPredicted RBP10.02□□□□□ -0.8
SYNGAP1-201ENST00000293748 SDF2L1Q9HCN8 221 aa10.02□□□□□ -0.8
SYNGAP1-201ENST00000293748 JPT1Q9UK76 154 aa10.02□□□□□ -0.8
SYNGAP1-201ENST00000293748 J3KRW8 73 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 REG1BP48304 166 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 DIRC2Q96SL1 478 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 TM2D1Q9BX74 207 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 PLAUP00749 431 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 SMIM13P0DJ93 91 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 PTGDSP41222 190 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 SNAI3Q3KNW1 292 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 GPHA2Q96T91 129 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 PRDM13Q9H4Q3 707 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 IGHV3-21A0A0B4J1V1 117 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 CLPSP04118 112 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 SNRPCP09234 159 aaKnown RBP10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 ID1P41134 155 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 TBL2Q9Y4P3 447 aaKnown RBP10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 ADAMTS20P59510 1910 aa10.02□□□□□ -0.81
SYNGAP1-201ENST00000293748 UBE2CO00762 179 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 RBFOX2O43251 390 aaKnown RBP eCLIP10.01□□□□□ -0.818e-7■■■■□ 24.2
SYNGAP1-201ENST00000293748 GPX4P36969 197 aaPredicted RBP10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 P2RY6Q15077 328 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 BIVMQ86UB2 503 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 DRAM1Q8N682 238 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 CHD8Q9HCK8 2581 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 FGF16O43320 207 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 STPG3Q8N7X2 389 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 CALYQ9NYX4 217 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 FAM208BQ5VWN6 2430 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 C17orf51A8MQB3 221 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 APELAP0DMC3 54 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 C10orf128Q5T292 105 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 ASPHD2Q6ICH7 369 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 DEPPQ9NTK1 212 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 SCN2AQ99250 2005 aa10.01□□□□□ -0.81
SYNGAP1-201ENST00000293748 NPIPB6E9PJ23 425 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 E9PLN8 166 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 NUDT3O95989 172 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 ARF6P62330 175 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 CYB5R2Q6BCY4 276 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 VKORC1Q9BQB6 163 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 PLSCR2Q9NRY7 297 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 OR11H12B2RN74 326 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 TMEM229AB2RXF0 380 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 F8VVB4 439 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 F8VWA3 439 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 THY1P04216 161 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 IL4P05112 153 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 EGR1P18146 543 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 OR11H1Q8NG94 326 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 OR11H2Q8NH07 326 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 CLDND2Q8NHS1 167 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 NEUROG1Q92886 237 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 NEU1Q99519 415 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 SLX1AQ9BQ83 275 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 VCANP13611 3396 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 FAM90A27PA6NNH2 459 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 SCGB1A1P11684 91 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 EGR4Q05215 589 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 ZNF146Q15072 292 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 ZNF414Q96IQ9 312 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 NPCDR1Q9BY65 106 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 RABAC1Q9UI14 185 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 TRAV30A0A087WSZ9 112 aa10□□□□□ -0.81
SYNGAP1-201ENST00000293748 PRR30Q53SZ7 412 aaPredicted RBP10□□□□□ -0.81
SYNGAP1-201ENST00000293748 KCNS1Q96KK3 526 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms