RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 HIST1H2BJP06899 126 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 PFN1P07737 140 aaKnown RBP5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 HIST1H2BOP23527 126 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 NPPCP23582 126 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 HIST1H2BBP33778 126 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 DLX6P56179 175 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 HIST1H2BDP58876 126 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 HIST1H2BCP62807 126 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 PRR20EP86478 221 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 PRR20CP86479 221 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 PRR20DP86480 221 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 PRR20BP86481 221 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 PRR20AP86496 221 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 FOXC1Q12948 553 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 HIST2H2BEQ16778 126 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 C2orf83Q53S99 150 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 PRR30Q53SZ7 412 aaPredicted RBP5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 MIC13Q5XKP0 118 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 SPNS3Q6ZMD2 512 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 ZCCHC24Q8N2G6 241 aaKnown RBP5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 OR1L8Q8NGR8 309 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 RND1Q92730 232 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 HIST1H2BHQ93079 126 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 HIST1H2BNQ99877 126 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 HIST1H2BMQ99879 126 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 PLEKHA3Q9HB20 300 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 DOK5Q9P104 306 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 PIEZO2Q9H5I5 2752 aa5.91□□□□□ -1.46
SPARCL1-201ENST00000282470 ACACAQ13085 2346 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 TRAV20A0A0B4J274 112 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 TEX50A0A1B0GTY4 177 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 LINC00587B1AMM8 73 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 E7EQL1 145 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 FABP1P07148 127 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 SAA1P0DJI8 122 aaPredicted RBP5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 ARL14EPLP0DKL9 152 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 CD99P14209 185 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 C16orf82Q7Z2V1 217 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 STPG3Q8N7X2 389 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 ANAPC16Q96DE5 110 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 SCNM1Q9BWG6 230 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 MRPL20Q9BYC9 149 aaKnown RBP5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 ZNRD1Q9P1U0 126 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 ARL2-SNX15V9GYD0 113 aa5.9□□□□□ -1.46
SPARCL1-201ENST00000282470 NDUFB3O43676 98 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 CLN5O75503 358 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 APOA2P02652 100 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 SFTPCP11686 197 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 CCL3L1P16619 93 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 CDX1P47902 265 aaPredicted RBP5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 GNB1P62873 340 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 RAB31Q13636 194 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 LRRC10Q5BKY1 277 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 OR51G1Q8NGK1 321 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 OR4A5Q8NH83 315 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 ST6GALNAC6Q969X2 333 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 PATZ1Q9HBE1 687 aaKnown RBP5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 CTSZQ9UBR2 303 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 SH3BGRL2Q9UJC5 107 aa5.9□□□□□ -1.47
SPARCL1-201ENST00000282470 FSTL3O95633 263 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 TRGC2P03986 189 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 MYOD1P15172 320 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 LOXP28300 417 aaPredicted RBP5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 RHOBP62745 196 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 FBXL19-AS1Q494R0 122 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 LYPD2Q6UXB3 125 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 TMEM144Q7Z5S9 345 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 PDPNQ86YL7 162 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 PNKDQ8N490 385 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 ABHD5Q8WTS1 349 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 TMEM186Q96B77 213 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 PCGF1Q9BSM1 259 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 CHODLQ9H9P2 273 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 NDUFA4L2Q9NRX3 87 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 SLC45A2Q9UMX9 530 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 YLPM1P49750 1951 aaKnown RBP5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 ICE1Q9Y2F5 2266 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 B9A039 149 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 H7BYZ3 331 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 DVL1O14640 695 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 S100A9P06702 114 aaKnown RBP5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 LINC00869P0C866 280 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 RNASE2P10153 161 aaKnown RBP5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 USF1P22415 310 aaPredicted RBP5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 S100PP25815 95 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 APOBEC3AP31941 199 aaPredicted RBP5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 SRP14P37108 136 aaKnown RBP5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 ATP5G3P48201 142 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 TMEM155Q4W5P6 130 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 ANKRD39Q53RE8 183 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 LINC01551Q86U37 167 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 NANPQ8TBE9 248 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 TMEM167AQ8TBQ9 72 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 SSMEM1Q8WWF3 244 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 CCL17Q92583 94 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 SLC35E1Q96K37 410 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 TMEM204Q9BSN7 226 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 SRD5A3Q9H8P0 318 aa5.89□□□□□ -1.47
SPARCL1-201ENST00000282470 ELOA3CA0A087WX78 387 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms