RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 LDLRAD4O15165 306 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 C1QTNF12Q5T7M4 302 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 ST6GALNAC3Q8NDV1 305 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 IMMP1LQ96LU5 166 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 DIDO1Q9BTC0 2240 aaKnown RBP9.67□□□□□ -0.86
USP53-201ENST00000274030 LYNX1G3V0Z9 82 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 COX6CP09669 75 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 LYNX1P0DP58 116 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 FOLR2P14207 255 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 OR10AG1Q8NH19 301 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 CBLN4Q9NTU7 201 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 TMEM238LA0A1B0GVL6 79 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 A6NJY4 79 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 GCSAMLQ5JQS6 135 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 DMRTA2Q96SC8 542 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 IFI27L2Q9H2X8 130 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 KIF13BQ9NQT8 1826 aa9.67□□□□□ -0.86
USP53-201ENST00000274030 CXorf65A6NEN9 183 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 PPP1R17O96001 155 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 RPS20P60866 119 aaKnown RBP9.66□□□□□ -0.86
USP53-201ENST00000274030 CLDND2Q8NHS1 167 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 HIST1H2BAQ96A08 127 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 IMMP2LQ96T52 175 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 RTBDNQ9BSG5 229 aaPredicted RBP9.66□□□□□ -0.86
USP53-201ENST00000274030 RALGAPA1Q6GYQ0 2036 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 CEACAM4O75871 244 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 FABP2P12104 132 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 PMCHL1Q16048 86 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 WDR82Q6UXN9 313 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 CLEC19AQ6UXS0 136 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 TMEM105Q8N8V8 129 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 ITLN2Q8WWU7 325 aaPredicted RBP9.66□□□□□ -0.86
USP53-201ENST00000274030 GEMIN7Q9H840 131 aaKnown RBP9.66□□□□□ -0.86
USP53-201ENST00000274030 TMEM160Q9NX00 188 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 SCO2A0A1W2PP80 73 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 SNAI2O43623 268 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 SLC25A34Q6PIV7 304 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 MRPL32Q9BYC8 188 aaKnown RBP9.66□□□□□ -0.86
USP53-201ENST00000274030 CHRNA10Q9GZZ6 450 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 A0A1B0GTI1 187 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 SIAH2O43255 324 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 HLA-DRB1P01911 266 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 TSPOP30536 169 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 KIR2DL4Q99706 377 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 C1QTNF5Q9BXJ0 243 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 C7orf69Q9H7B7 122 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 DOCK10Q96BY6 2186 aa9.66□□□□□ -0.86
USP53-201ENST00000274030 KBTBD11-OT1A0A1B0GTJ5 212 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 EFEMP2O95967 443 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 TGFAP01135 160 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 SCGB1A1P11684 91 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 ATP5G3P48201 142 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 WDYHV1Q96HA8 205 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 TM2D1Q9BX74 207 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 TRAV8-6A0A0B4J262 113 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 MRPL14Q6P1L8 145 aaKnown RBP9.65□□□□□ -0.86
USP53-201ENST00000274030 PLPPR1Q8TBJ4 325 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 CD8AP01732 235 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 EMP1P54849 157 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 SUMO2P61956 95 aaKnown RBP9.65□□□□□ -0.86
USP53-201ENST00000274030 PET117Q6UWS5 81 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 FADS6Q8N9I5 356 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 WNT10AQ9GZT5 417 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 UQCR10Q9UDW1 63 aa9.65□□□□□ -0.86
USP53-201ENST00000274030 CACNA1BQ00975 2339 aa9.65□□□□□ -0.87
USP53-201ENST00000274030 A0A0B4J293 547 aa9.65□□□□□ -0.87
USP53-201ENST00000274030 OSR1Q8TAX0 266 aaPredicted RBP9.65□□□□□ -0.87
USP53-201ENST00000274030 FAM57AQ8TBR7 257 aa9.65□□□□□ -0.87
USP53-201ENST00000274030 MARVELD3Q96A59 401 aa9.65□□□□□ -0.87
USP53-201ENST00000274030 C19orf24Q9BVV8 132 aa9.65□□□□□ -0.87
USP53-201ENST00000274030 SCN10AQ9Y5Y9 1956 aa9.65□□□□□ -0.87
USP53-201ENST00000274030 J3QW42 95 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 NR2C2APQ86WQ0 139 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 ZNF646O15015 1829 aaPredicted RBP9.64□□□□□ -0.87
USP53-201ENST00000274030 CEACAM1P13688 526 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 PLP1P60201 277 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 CD69Q07108 199 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 TMEM170BQ5T4T1 132 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 PPP1R27Q86WC6 154 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 TEX45Q8NA69 505 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 FAM168AQ92567 244 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 DEPPQ9NTK1 212 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 HBBP68871 147 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 MIR17HGQ75NE6 70 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 OR13C6PQ8NH95 151 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 C21orf62Q9NYP8 219 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 UCP1P25874 307 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 C12orf54Q6X4T0 127 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 PSMG3Q9BT73 122 aaPredicted RBP9.64□□□□□ -0.87
USP53-201ENST00000274030 K7ERU9 68 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 CA7P43166 264 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 LINC00114Q6XXX2 140 aa9.64□□□□□ -0.87
USP53-201ENST00000274030 IGKV1D-13A0A0B4J2D9 117 aa9.63□□□□□ -0.87
USP53-201ENST00000274030 IGKV1-13P0DP09 117 aa9.63□□□□□ -0.87
USP53-201ENST00000274030 DDTP30046 118 aa9.63□□□□□ -0.87
USP53-201ENST00000274030 LHX2P50458 406 aa9.63□□□□□ -0.87
USP53-201ENST00000274030 GLMPQ8WWB7 406 aa9.63□□□□□ -0.87
USP53-201ENST00000274030 WBP1Q96G27 269 aa9.63□□□□□ -0.87
USP53-201ENST00000274030 C17orf100A8MU93 164 aa9.63□□□□□ -0.87
USP53-201ENST00000274030 NPIPB7O75200 414 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms