RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 CCL8P80075 99 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 LINC01551Q86U37 167 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 NABP2Q9BQ15 211 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 PDLIM4P50479 330 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 WFDC8Q8IUA0 241 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 IQCF2Q8IXL9 164 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 STPG3Q8N7X2 389 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 C8orf46Q8TAG6 207 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 TMEM186Q96B77 213 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 C19orf24Q9BVV8 132 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 MRPL20Q9BYC9 149 aaKnown RBP9.05□□□□□ -0.96
MSH3-201ENST00000265081 SLC35D1Q9NTN3 355 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 MSRB2Q9Y3D2 182 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 IGHV3-7P01780 117 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 CRYGBP07316 175 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 GPX4P36969 197 aaPredicted RBP9.05□□□□□ -0.96
MSH3-201ENST00000265081 RPL31P62899 125 aaKnown RBP9.05□□□□□ -0.96
MSH3-201ENST00000265081 PRR30Q53SZ7 412 aaPredicted RBP9.05□□□□□ -0.96
MSH3-201ENST00000265081 ZNF114Q8NC26 417 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 TNFRSF14Q92956 283 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 IGKV1OR2-108A0A075B7D4 117 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 J3QR06 171 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 RBMXL2O75526 392 aaKnown RBP9.05□□□□□ -0.96
MSH3-201ENST00000265081 RPS16P62249 146 aaKnown RBP9.05□□□□□ -0.96
MSH3-201ENST00000265081 MIC13Q5XKP0 118 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 LYPD2Q6UXB3 125 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 OR5G3P0C626 314 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 ARL14EPLP0DKL9 152 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 DEFA4P12838 97 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 RPS10P46783 165 aaKnown RBP9.05□□□□□ -0.96
MSH3-201ENST00000265081 ZNF841Q6ZN19 808 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 OR4F5Q8NH21 305 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 OR4F4Q96R69 305 aa9.05□□□□□ -0.96
MSH3-201ENST00000265081 TRBV23-1A0A0A0MS06 115 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 GNG10P50151 68 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 CEBPGP53567 150 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 CACNG8Q8WXS5 425 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 ZNRD1Q9P1U0 126 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 C9JCJ5 164 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 S100A6P06703 90 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 MYOD1P15172 320 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 APOBEC3AP31941 199 aaPredicted RBP9.04□□□□□ -0.96
MSH3-201ENST00000265081 ATP5G3P48201 142 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 KIAA0141Q14154 515 aaPredicted RBP9.04□□□□□ -0.96
MSH3-201ENST00000265081 HIST3H2BBQ8N257 126 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 ZNF503Q96F45 646 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 PATZ1Q9HBE1 687 aaKnown RBP9.04□□□□□ -0.96
MSH3-201ENST00000265081 B9A039 149 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 TRGC2P03986 189 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 USF1P22415 310 aaPredicted RBP9.04□□□□□ -0.96
MSH3-201ENST00000265081 LCN2P80188 198 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 RND1Q92730 232 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 FRZBQ92765 325 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 NGBQ9NPG2 151 aa9.04□□□□□ -0.96
MSH3-201ENST00000265081 YTHDF2Q9Y5A9 579 aaKnown RBP9.04□□□□□ -0.96
MSH3-201ENST00000265081 PRRC2CQ9Y520 2896 aaKnown RBP9.03□□□□□ -0.96
MSH3-201ENST00000265081 TRBV20OR9-2A0A075B6H5 130 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 HMGB3O15347 200 aaKnown RBP9.03□□□□□ -0.96
MSH3-201ENST00000265081 GCHFRP30047 84 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 B2MP61769 119 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 ACTL10Q5JWF8 245 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 THAP8Q8NA92 274 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 DEFB108BQ8NET1 73 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 PLEKHA3Q9HB20 300 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 SEPSECSQ9HD40 501 aaKnown RBP9.03□□□□□ -0.96
MSH3-201ENST00000265081 MGAQ8IWI9 3026 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 KALRNO60229 2985 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 CCL3L1P16619 93 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 RHOBP62745 196 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 FOXL1Q12952 345 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 GAMTQ14353 236 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 DVL1O14640 695 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 SIAH2O43255 324 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 CA7P43166 264 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 CD69Q07108 199 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 SCNM1Q9BWG6 230 aa9.03□□□□□ -0.96
MSH3-201ENST00000265081 IGLV1-47P01700 117 aa9.02□□□□□ -0.96
MSH3-201ENST00000265081 IGHV2-70P01814 119 aa9.02□□□□□ -0.96
MSH3-201ENST00000265081 TRGC1P0CF51 173 aa9.02□□□□□ -0.96
MSH3-201ENST00000265081 IGHV1-8P0DP01 117 aa9.02□□□□□ -0.96
MSH3-201ENST00000265081 IGFBP2P18065 325 aa9.02□□□□□ -0.96
MSH3-201ENST00000265081 ZNF674Q2M3X9 581 aa9.02□□□□□ -0.96
MSH3-201ENST00000265081 LRRC10Q5BKY1 277 aa9.02□□□□□ -0.96
MSH3-201ENST00000265081 OR4C13Q8NGP0 309 aa9.02□□□□□ -0.96
MSH3-201ENST00000265081 FUT9Q9Y231 359 aa9.02□□□□□ -0.96
MSH3-201ENST00000265081 RBPJQ06330 500 aa9.02□□□□□ -0.97
MSH3-201ENST00000265081 NANPQ8TBE9 248 aa9.02□□□□□ -0.97
MSH3-201ENST00000265081 RNASEH2CQ8TDP1 164 aaKnown RBP9.02□□□□□ -0.97
MSH3-201ENST00000265081 NBEAQ8NFP9 2946 aa9.02□□□□□ -0.97
MSH3-201ENST00000265081 PPP1R2P9O14990 202 aa9.02□□□□□ -0.97
MSH3-201ENST00000265081 NDUFB3O43676 98 aa9.02□□□□□ -0.97
MSH3-201ENST00000265081 CRYGCP07315 174 aa9.02□□□□□ -0.97
MSH3-201ENST00000265081 PPOXP50336 477 aa9.02□□□□□ -0.97
MSH3-201ENST00000265081 AKR1D1P51857 326 aa9.02□□□□□ -0.97
MSH3-201ENST00000265081 FAM3BP58499 235 aaPredicted RBP9.02□□□□□ -0.97
MSH3-201ENST00000265081 RPL15P61313 204 aaKnown RBP9.02□□□□□ -0.97
MSH3-201ENST00000265081 ADIRFQ15847 76 aa9.02□□□□□ -0.97
MSH3-201ENST00000265081 RPUSD4Q96CM3 377 aaKnown RBP9.02□□□□□ -0.97
MSH3-201ENST00000265081 URGCP-MRPS24S4R325 110 aa9.02□□□□□ -0.97
MSH3-201ENST00000265081 TRAV9-1A0A075B6T8 112 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms