RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 OTX1P32242 354 aaPredicted RBP14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 SAMD13Q5VXD3 122 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 OR2K2Q8NGT1 345 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 IGKV3D-15A0A087WSY6 115 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 A0A1B0GWB2 263 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 IGKV3-15P01624 115 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 ZNF818PQ6ZRF7 136 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 LOXL4Q96JB6 756 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 TMEM50AO95807 157 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 IGHV3-72A0A0B4J1Y9 119 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 SNRPCP09234 159 aaKnown RBP14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 TMEM187Q14656 261 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 RTN4RQ9BZR6 473 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 FAM159AQ6UWV7 190 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 LINC00305Q7Z4B0 112 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 VKORC1L1Q8N0U8 176 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 TMEM262E9PQX1 116 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 ERVH48-1M5A8F1 160 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 SIGLEC5O15389 551 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 ZG16O60844 167 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 FOXC2Q99958 501 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 KLK15Q9H2R5 256 aa14.92□□□□□ -0.02
NOTCH3-201ENST00000263388 REG1AP05451 166 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 TMEM170BQ5T4T1 132 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 ZNF729A6NN14 1252 aaPredicted RBP14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 ZNF826PQ6ZT77 177 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 G6PC2Q9NQR9 355 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 RNF115Q9Y4L5 304 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 TFPI2P48307 235 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 SPCS1Q9Y6A9 102 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 GOLT1AQ6ZVE7 132 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 TCF19Q9Y242 345 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 MED13LQ71F56 2210 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 IGKV3D-11A0A0A0MRZ8 115 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 J3QW42 95 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 IGKV3-11P04433 115 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 DMRTA1Q5VZB9 504 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 POC1AQ8NBT0 407 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 OR9G1Q8NH87 305 aa14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 PHLDA1Q8WV24 401 aaPredicted RBP14.91□□□□□ -0.02
NOTCH3-201ENST00000263388 PPIAL4CA0A0B4J2A2 164 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 FTH1P19P0C7X4 201 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 PPIAL4GP0DN37 164 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 TMEM95Q3KNT9 176 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 NPPCP23582 126 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 ABHD12Q8N2K0 398 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 TRBV20OR9-2A0A075B6H5 130 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 PQLC2LA1A4F0 135 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 TM4SF5O14894 197 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 GATAD1Q8WUU5 269 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 FAM74A4Q5TZK3 123 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 LOC105371242A0A075B767 164 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 SYNGR3O43761 229 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 C2orf68Q2NKX9 166 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 LINC00518Q8N0U6 118 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 NABP2Q9BQ15 211 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 KIAA1549LQ6ZVL6 1849 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 ASPHD2Q6ICH7 369 aa14.9□□□□□ -0.02
NOTCH3-201ENST00000263388 CELA2AP08217 269 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 CNTFRP26992 372 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 NUTF2P61970 127 aaKnown RBP14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 ZNF324BQ6AW86 544 aaPredicted RBP14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 BIVMQ86UB2 503 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 CTAG1AP78358 180 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 C1QTNF12Q5T7M4 302 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 FMC1Q96HJ9 113 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 LCN2P80188 198 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 AMELYQ99218 206 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 DERL1Q9BUN8 251 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 EML5Q05BV3 1969 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 NPIPB11E5RHQ5 1161 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 COX6B1P14854 86 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 KCNS1Q96KK3 526 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 SLC17A3O00476 420 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 ATOH7Q8N100 152 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 SDHCQ99643 169 aaPredicted RBP14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 CLDN16Q9Y5I7 305 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 A0A1B0GW15 77 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 C1QCP02747 245 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 FHL5Q5TD97 284 aa14.89□□□□□ -0.03
NOTCH3-201ENST00000263388 IGHV3OR16-12A0A075B7B8 117 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 TRBV7-9A0A0J9YWB2 115 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 CTHRC1Q96CG8 243 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 CBLN1P23435 193 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 ANAPC13Q9BS18 74 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 NPCDR1Q9BY65 106 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 GRIFINA4D1Z8 144 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 PATE3B3GLJ2 98 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 GCHFRP30047 84 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 RRHO14718 337 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 SP7Q8TDD2 431 aaPredicted RBP14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 TMEM54Q969K7 222 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 NDUFS8O00217 210 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 ZNF600Q6ZNG1 722 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 GPHA2Q96T91 129 aa14.88□□□□□ -0.03
NOTCH3-201ENST00000263388 OR11H4Q8NGC9 324 aa14.87□□□□□ -0.03
NOTCH3-201ENST00000263388 THY1P04216 161 aa14.87□□□□□ -0.03
NOTCH3-201ENST00000263388 LRTM2Q8N967 370 aa14.87□□□□□ -0.03
NOTCH3-201ENST00000263388 OR5P3Q8WZ94 311 aa14.87□□□□□ -0.03
NOTCH3-201ENST00000263388 SSBP4Q9BWG4 385 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms