RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ZNF773Q6PK81 442 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 ALKAL1Q6UXT8 129 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 SCGB1D4Q6XE38 83 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 HIST3H2BBQ8N257 126 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM86AQ8N2M4 240 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF615Q8N8J6 731 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 OR11G2Q8NGC1 345 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 OR11H7Q8NGC8 314 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PPTC7Q8NI37 304 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 GEMIN6Q8WXD5 167 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM158Q8WZ71 300 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM106AQ96A25 262 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 BMFQ96LC9 184 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 LYSMD1Q96S90 227 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PRADC1Q9BSG0 188 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 SFXN3Q9BWM7 321 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 CHST6Q9GZX3 395 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PBOV1Q9GZY1 135 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM133Q9H2Q1 129 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 FBXL12Q9NXK8 326 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 TAS2R8Q9NYW2 309 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 SIGLEC7Q9Y286 467 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 PKIGQ9Y2B9 76 aa2.76□□□□□ -1.97
CCDC54-201ENST00000261058 YTHDF2Q9Y5A9 579 aaKnown RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 SOX21Q9Y651 276 aaPredicted RBP2.76□□□□□ -1.97
CCDC54-201ENST00000261058 RIC1Q4ADV7 1423 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 CASKIN1Q8WXD9 1431 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 MAGI2Q86UL8 1455 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 EPRSP07814 1512 aaKnown RBP2.75□□□□□ -1.97
CCDC54-201ENST00000261058 A0A096LNJ9 63 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 LOC102724200A0A096LPH7 203 aaPredicted RBP2.75□□□□□ -1.97
CCDC54-201ENST00000261058 A0A1W2PRS3 328 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 PGPA6NDG6 321 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 M0R233 179 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF682O95780 498 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 SHBGP04278 402 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 REG1AP05451 166 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 CTSDP07339 412 aaPredicted RBP2.75□□□□□ -1.97
CCDC54-201ENST00000261058 LGALS1P09382 135 aaKnown RBP2.75□□□□□ -1.97
CCDC54-201ENST00000261058 SPNP16150 400 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF708P17019 499 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 OR10J1P30954 320 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 P2RX1P51575 399 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 SLC18A1P54219 525 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 CACNG7P62955 275 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 GRB2P62993 217 aaKnown RBP2.75□□□□□ -1.97
CCDC54-201ENST00000261058 HMGN3Q15651 99 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 FBXL19-AS1Q494R0 122 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM244Q5VVB8 128 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 LCN12Q6JVE5 192 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 RASL11AQ6T310 242 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 CLEC19AQ6UXS0 136 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 FOXI2Q6ZQN5 318 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF550Q7Z398 422 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 OR51A4Q8NGJ6 313 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 IP6K3Q96PC2 410 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 C1QTNF6Q9BXI9 259 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 SEC11CQ9BY50 192 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 PARP12Q9H0J9 701 aaKnown RBP2.75□□□□□ -1.97
CCDC54-201ENST00000261058 IER3IP1Q9Y5U9 82 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 PTPRKQ15262 1439 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 WDR62O43379 1518 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 MAGI3Q5TCQ9 1506 aa2.75□□□□□ -1.97
CCDC54-201ENST00000261058 DOCK3Q8IZD9 2030 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 TRAV5A0A0B4J249 113 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 FAM236DA0A1B0GTK5 79 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 PLAC8L1A1L4L8 177 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM212A6NML5 194 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 C8orf87E5RJ46 101 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 OR2A4O95047 310 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 CA2P00918 260 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 TRBV12-3P01733 135 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 CSN2P05814 226 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 GPX1P07203 203 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 OR4A8P0C604 315 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 FAM236CP0DP71 79 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 PZPP20742 1482 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 PRSS3P35030 304 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 GUCA1AP43080 201 aaPredicted RBP2.74□□□□□ -1.97
CCDC54-201ENST00000261058 SYNJ2BPP57105 145 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 UBE2NP61088 152 aaKnown RBP2.74□□□□□ -1.97
CCDC54-201ENST00000261058 DAD1P61803 113 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 RPS24P62847 133 aaKnown RBP2.74□□□□□ -1.97
CCDC54-201ENST00000261058 BTG2P78543 158 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 MYL5Q02045 173 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM267Q0VDI3 215 aaPredicted RBP2.74□□□□□ -1.97
CCDC54-201ENST00000261058 DHRS2Q13268 280 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 PDGFRLQ15198 375 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 Q499Y3 187 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 KHDC3LQ587J8 217 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 COA6Q5JTJ3 125 aaKnown RBP2.74□□□□□ -1.97
CCDC54-201ENST00000261058 TMEM236Q5W0B7 351 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 ZNF695Q8IW36 515 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 TTC9CQ8N5M4 171 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 OR52R1Q8NGF1 315 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 OR10G6Q8NH81 332 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 LRRC29Q8WV35 223 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 PSMF1Q92530 271 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 CCL17Q92583 94 aa2.74□□□□□ -1.97
CCDC54-201ENST00000261058 ADAT3Q96EY9 351 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms