RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 FAM122BQ7Z309 247 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 OR5A1Q8NGJ0 315 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 OR10G8Q8NGN5 311 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 KIR2DL5BQ8NHK3 375 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 CACNG8Q8WXS5 425 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 TMEM30AQ9NV96 361 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 EFNB2P52799 333 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 HILS1P60008 231 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 HIST3H3Q16695 136 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 FAM219BQ5XKK7 198 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 C16orf54Q6UWD8 224 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 PRSS57Q6UWY2 283 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 PRSS45Q7RTY3 260 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 SRSF12Q8WXF0 261 aaKnown RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 MRGPRFQ96AM1 343 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 SLC25A37Q9NYZ2 338 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 RPUSD1Q9UJJ7 312 aaKnown RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 VPREB3Q9UKI3 123 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 ZFP30Q9Y2G7 519 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 CHCHD2Q9Y6H1 151 aaPredicted RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 BRWD3Q6RI45 1802 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 CACNA1EQ15878 2313 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 IGHV3OR16-13A0A075B7E8 117 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 IGHV3-74A0A0B4J1X5 117 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 IGHV3-35A0A0C4DH35 117 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 MSGN1A6NI15 193 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 M0R143 59 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 GCM2O75603 506 aaPredicted RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 NTN1O95631 604 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 CD3DP04234 171 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 HSPB1P04792 205 aaKnown RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 RPLP1P05386 114 aaKnown RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 JUNBP17275 347 aaPredicted RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 TPTE2P1Q5T6R2 138 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 C10orf111Q8N326 155 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 SRXN1Q9BYN0 137 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 SLC35B3Q9H1N7 401 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 DAZ1Q9NQZ3 744 aaKnown RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 COX11Q9Y6N1 276 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 TRPM6Q9BX84 2022 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 UNC13CQ8NB66 2214 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 ARID1BQ8NFD5 2236 aaPredicted RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 COL6A6A6NMZ7 2263 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 CTXND1A0A1B0GTU2 59 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 GREM1O60565 184 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 TIAF1O95411 115 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 CSN3P07498 182 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 P2RY1P47900 373 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 WNT3P56703 355 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 TCTAP57738 103 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 SNRPNP63162 240 aaKnown RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 RAE1P78406 368 aaKnown RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 IGLV3-21P80748 117 aaPredicted RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 SIGLEC15Q6ZMC9 328 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 C8orf86Q6ZUL3 223 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 ZNRF1Q8ND25 227 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 MZB1Q8WU39 189 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 MRPL18Q9H0U6 180 aaKnown RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 SLC25A32Q9H2D1 315 aa3.38□□□□□ -1.87
RNF38-201ENST00000259605 CHTOPQ9Y3Y2 248 aaKnown RBP3.38□□□□□ -1.87
RNF38-201ENST00000259605 IGHV3-49A0A0A0MS15 119 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 SRSF10O75494 262 aaKnown RBP3.37□□□□□ -1.87
RNF38-201ENST00000259605 UPK1BO75841 260 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 VENTXO95231 258 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 CA2P00918 260 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 UMODP07911 640 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 GP9P14770 177 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 HOXA5P20719 270 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 DAZAP2Q15038 168 aaPredicted RBP3.37□□□□□ -1.87
RNF38-201ENST00000259605 SP6Q3SY56 376 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 Q6AWC8 147 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 LDLRAD3Q86YD5 345 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 GPHB5Q86YW7 130 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 BAP18Q8IXM2 172 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 NABP1Q96AH0 204 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 RARRES2Q99969 163 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 FAM103A1Q9BTL3 118 aaKnown RBP3.37□□□□□ -1.87
RNF38-201ENST00000259605 TCF19Q9Y242 345 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 THSD7AQ9UPZ6 1657 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 TRAV34A0A0B4J273 112 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 M0R381 172 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 IGHV1-46P01743 117 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 PFN1P07737 140 aaKnown RBP3.37□□□□□ -1.87
RNF38-201ENST00000259605 PPIFP30405 207 aaKnown RBP3.37□□□□□ -1.87
RNF38-201ENST00000259605 FGF9P31371 208 aaPredicted RBP3.37□□□□□ -1.87
RNF38-201ENST00000259605 GLIPR1P48060 266 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 ACTL10Q5JWF8 245 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 DLEU7Q6UYE1 221 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 ANAPC16Q96DE5 110 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 C1orf43Q9BWL3 253 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 GSX2Q9BZM3 304 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 VCX2Q9H322 139 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 TRAPPC1Q9Y5R8 145 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 IGHV1-18A0A0C4DH31 117 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 TMEM272A0A1B0GTI8 110 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 C11orf94C9JXX5 98 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 TMEM178BH3BS89 294 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 PNRC1Q12796 327 aaPredicted RBP3.37□□□□□ -1.87
RNF38-201ENST00000259605 TMEM255AQ5JRV8 349 aa3.37□□□□□ -1.87
RNF38-201ENST00000259605 FAM120AOSQ5T036 256 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms