RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ABHD12Q8N2K0 398 aa11.22□□□□□ -0.61
PCDHGA3-201ENST00000253812 SNRNP200O75643 2136 aaKnown RBP11.22□□□□□ -0.61
PCDHGA3-201ENST00000253812 ACACAQ13085 2346 aa11.22□□□□□ -0.61
PCDHGA3-201ENST00000253812 CACNA1EQ15878 2313 aa11.22□□□□□ -0.61
PCDHGA3-201ENST00000253812 DPM2O94777 84 aa11.21□□□□□ -0.61
PCDHGA3-201ENST00000253812 APELAP0DMC3 54 aa11.21□□□□□ -0.61
PCDHGA3-201ENST00000253812 MPZP25189 248 aa11.21□□□□□ -0.61
PCDHGA3-201ENST00000253812 GAGE1Q13065 139 aa11.21□□□□□ -0.61
PCDHGA3-201ENST00000253812 TNFRSF14Q92956 283 aa11.21□□□□□ -0.61
PCDHGA3-201ENST00000253812 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.61
PCDHGA3-201ENST00000253812 ADRA2AP08913 450 aa11.21□□□□□ -0.62
PCDHGA3-201ENST00000253812 SNHG12Q9BXW3 62 aa11.21□□□□□ -0.62
PCDHGA3-201ENST00000253812 SPTBP11277 2137 aa11.21□□□□□ -0.62
PCDHGA3-201ENST00000253812 H0YIZ8 118 aa11.21□□□□□ -0.62
PCDHGA3-201ENST00000253812 LINC01590Q5TEZ4 76 aa11.21□□□□□ -0.62
PCDHGA3-201ENST00000253812 C20orf144Q9BQM9 153 aa11.21□□□□□ -0.62
PCDHGA3-201ENST00000253812 RTBDNQ9BSG5 229 aaPredicted RBP11.21□□□□□ -0.62
PCDHGA3-201ENST00000253812 PLA2G3Q9NZ20 509 aa11.21□□□□□ -0.62
PCDHGA3-201ENST00000253812 ZNF525Q8N782 197 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 NAA38Q9BRA0 125 aaKnown RBP11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 A0A1B0GW64 132 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 NBEAP1P0C6P0 100 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 TSPAN7P41732 249 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 VKORC1L1Q8N0U8 176 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 GCSAMQ8N6F7 178 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 MYOFQ9NZM1 2061 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 MPV17P39210 176 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 FOXL1Q12952 345 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 DEFB124Q8NES8 71 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 OR52E5Q8NH55 327 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 C16orf92Q96LL3 132 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 DLL3Q9NYJ7 618 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 CACNA1IQ9P0X4 2223 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 A0A1B0GWJ7 208 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 A0A1W2PPV9 198 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 OR2H2O95918 312 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 SUMO2P61956 95 aaKnown RBP11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 CACNG7P62955 275 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 WFDC6Q9BQY6 131 aa11.2□□□□□ -0.62
PCDHGA3-201ENST00000253812 LTBP1Q14766 1721 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 SS18L1O75177 396 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 PRTN3P24158 256 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 HCP5Q6MZN7 132 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 SAXO1Q8IYX7 474 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 ZDHHC16Q969W1 377 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 RASL10BQ96S79 203 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 VKORC1Q9BQB6 163 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 SCN3AQ9NY46 2000 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 NDUFA3O95167 84 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 NPSP0C0P6 89 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 TEX38Q6PEX7 206 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 LHFPL4Q7Z7J7 247 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 HRKO00198 91 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 IGHV4-39P01824 125 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 ASCL5Q7RTU5 278 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 BCL6BQ8N143 479 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 CIARTQ8N365 385 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 A0A1W2PRE2 83 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 ZNF146Q15072 292 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 WFDC3Q8IUB2 231 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 NPIPB3Q92617 1050 aa11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA3-201ENST00000253812 RAB9AP51151 201 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 DRAM1Q8N682 238 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 TPRX1Q8N7U7 411 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 RAB1CQ92928 201 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 EAF1Q96JC9 268 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 ALPK2Q86TB3 2170 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 ATXN8Q156A1 80 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 UCN2Q96RP3 112 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 SLX1AQ9BQ83 275 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 TRAV17A0A0B4J275 112 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 UBE2L6O14933 153 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 REG1BP48304 166 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 KIR3DL3Q8N743 410 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 IFI27L1Q96BM0 104 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 COQ2Q96H96 371 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 DIRC2Q96SL1 478 aa11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 RNASE7Q9H1E1 156 aaKnown RBP11.18□□□□□ -0.62
PCDHGA3-201ENST00000253812 TRAV24A0A0B4J272 114 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 ODAMA1E959 279 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 COX5BP10606 129 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 IL11RAQ14626 422 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 DOPEY2Q9Y3R5 2298 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 INTS1Q8N201 2190 aaKnown RBP11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 H3BTX0 84 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 NAPSAO96009 420 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 NGFRP08138 427 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 TMEM256Q8N2U0 113 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 FMC1Q96HJ9 113 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 ZNF385AQ96PM9 386 aaKnown RBP11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 ATP6V0BQ99437 205 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 SMPXQ9UHP9 88 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 LOC105371242A0A075B767 164 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 PPIAL4CA0A0B4J2A2 164 aa11.17□□□□□ -0.62
PCDHGA3-201ENST00000253812 PPIHO43447 177 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms