RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 FAAP20Q6NZ36 180 aa17.51■□□□□ 0.39
LSM4-201ENST00000252816 OR1L8Q8NGR8 309 aa17.51■□□□□ 0.39
LSM4-201ENST00000252816 MRGPRFQ96AM1 343 aa17.51■□□□□ 0.39
LSM4-201ENST00000252816 SEC22AQ96IW7 307 aa17.51■□□□□ 0.39
LSM4-201ENST00000252816 CCDC140Q96MF4 163 aa17.51■□□□□ 0.39
LSM4-201ENST00000252816 NXF2Q9GZY0 626 aaKnown RBP17.51■□□□□ 0.39
LSM4-201ENST00000252816 NDUFA4L2Q9NRX3 87 aa17.51■□□□□ 0.39
LSM4-201ENST00000252816 DBX1A6NMT0 343 aa17.5■□□□□ 0.39
LSM4-201ENST00000252816 SNAPC5O75971 98 aa17.5■□□□□ 0.39
LSM4-201ENST00000252816 GP9P14770 177 aa17.5■□□□□ 0.39
LSM4-201ENST00000252816 HIST1H1BP16401 226 aaKnown RBP17.5■□□□□ 0.39
LSM4-201ENST00000252816 PIGPP57054 158 aa17.5■□□□□ 0.39
LSM4-201ENST00000252816 WT1-ASQ06250 92 aa17.5■□□□□ 0.39
LSM4-201ENST00000252816 CD69Q07108 199 aa17.5■□□□□ 0.39
LSM4-201ENST00000252816 TERB2Q8NHR7 220 aa17.5■□□□□ 0.39
LSM4-201ENST00000252816 ZNF486Q96H40 463 aaPredicted RBP17.5■□□□□ 0.39
LSM4-201ENST00000252816 OR51B2Q9Y5P1 312 aa17.5■□□□□ 0.39
LSM4-201ENST00000252816 HLA-AP01891 365 aaKnown RBP17.49■□□□□ 0.39
LSM4-201ENST00000252816 CSN3P07498 182 aa17.49■□□□□ 0.39
LSM4-201ENST00000252816 OR13C7P0DN81 318 aa17.49■□□□□ 0.39
LSM4-201ENST00000252816 TNFSF8P32971 234 aa17.49■□□□□ 0.39
LSM4-201ENST00000252816 TATDN3Q17R31 274 aa17.49■□□□□ 0.39
LSM4-201ENST00000252816 SCGB2B2Q4G0G5 96 aa17.49■□□□□ 0.39
LSM4-201ENST00000252816 THOC7Q6I9Y2 204 aaKnown RBP17.49■□□□□ 0.39
LSM4-201ENST00000252816 OR13C8Q8NGS7 320 aa17.49■□□□□ 0.39
LSM4-201ENST00000252816 MCFD2Q8NI22 146 aa17.49■□□□□ 0.39
LSM4-201ENST00000252816 SOSTQ9BQB4 213 aa17.49■□□□□ 0.39
LSM4-201ENST00000252816 HINT2Q9BX68 163 aa17.49■□□□□ 0.39
LSM4-201ENST00000252816 RABL2AQ9UBK7 228 aaPredicted RBP17.49■□□□□ 0.39
LSM4-201ENST00000252816 RABL2BQ9UNT1 228 aa17.49■□□□□ 0.39
LSM4-201ENST00000252816 MFSD2BA6NFX1 497 aa17.48■□□□□ 0.39
LSM4-201ENST00000252816 FAM209BQ5JX69 171 aa17.48■□□□□ 0.39
LSM4-201ENST00000252816 C11orf87Q6NUJ2 197 aa17.48■□□□□ 0.39
LSM4-201ENST00000252816 CLEC19AQ6UXS0 136 aa17.48■□□□□ 0.39
LSM4-201ENST00000252816 TP53RKQ96S44 253 aa17.48■□□□□ 0.39
LSM4-201ENST00000252816 TMEM14BQ9NUH8 114 aa17.48■□□□□ 0.39
LSM4-201ENST00000252816 PRNDQ9UKY0 176 aa17.48■□□□□ 0.39
LSM4-201ENST00000252816 C15orf61A6NNL5 157 aa17.47■□□□□ 0.39
LSM4-201ENST00000252816 H0Y980 276 aa17.47■□□□□ 0.39
LSM4-201ENST00000252816 SERPINE2P07093 398 aa17.47■□□□□ 0.39
LSM4-201ENST00000252816 MEF2DQ14814 521 aa17.47■□□□□ 0.39
LSM4-201ENST00000252816 GDPD1Q8N9F7 314 aa17.47■□□□□ 0.39
LSM4-201ENST00000252816 MARCH1Q8TCQ1 289 aa17.47■□□□□ 0.39
LSM4-201ENST00000252816 EEF1AKMT3Q96AZ1 226 aa17.47■□□□□ 0.39
LSM4-201ENST00000252816 RBM38Q9H0Z9 239 aaKnown RBP17.47■□□□□ 0.39
LSM4-201ENST00000252816 GSTZ1O43708 216 aaPredicted RBP17.46■□□□□ 0.39
LSM4-201ENST00000252816 GGCTO75223 188 aaKnown RBP17.46■□□□□ 0.39
LSM4-201ENST00000252816 OR2C1O95371 312 aa17.46■□□□□ 0.39
LSM4-201ENST00000252816 H2BFWTQ7Z2G1 175 aa17.46■□□□□ 0.39
LSM4-201ENST00000252816 HSD17B13Q7Z5P4 300 aaPredicted RBP17.46■□□□□ 0.39
LSM4-201ENST00000252816 OR4C16Q8NGL9 310 aa17.46■□□□□ 0.39
LSM4-201ENST00000252816 ZFAND1Q8TCF1 268 aa17.46■□□□□ 0.39
LSM4-201ENST00000252816 LSM10Q969L4 123 aaKnown RBP17.46■□□□□ 0.39
LSM4-201ENST00000252816 TSC22D3Q99576 134 aa17.46■□□□□ 0.39
LSM4-201ENST00000252816 FKBP11Q9NYL4 201 aa17.46■□□□□ 0.39
LSM4-201ENST00000252816 SIGLEC8Q9NYZ4 499 aa17.46■□□□□ 0.39
LSM4-201ENST00000252816 CCDC160A6NGH7 325 aa17.45■□□□□ 0.38
LSM4-201ENST00000252816 AKAIN1P0CW23 69 aa17.45■□□□□ 0.38
LSM4-201ENST00000252816 MFAP2P55001 183 aa17.45■□□□□ 0.38
LSM4-201ENST00000252816 IZUMO4Q1ZYL8 232 aa17.45■□□□□ 0.38
LSM4-201ENST00000252816 ADAMTSL5Q6ZMM2 481 aa17.45■□□□□ 0.38
LSM4-201ENST00000252816 OR5B3Q8NH48 314 aa17.45■□□□□ 0.38
LSM4-201ENST00000252816 COPZ2Q9P299 210 aa17.45■□□□□ 0.38
LSM4-201ENST00000252816 RSL24D1Q9UHA3 163 aaKnown RBP17.45■□□□□ 0.38
LSM4-201ENST00000252816 C3orf85A0A1B0GTC6 90 aa17.44■□□□□ 0.38
LSM4-201ENST00000252816 FABP12A6NFH5 140 aa17.44■□□□□ 0.38
LSM4-201ENST00000252816 IGKV1-5P01602 117 aa17.44■□□□□ 0.38
LSM4-201ENST00000252816 CTSDP07339 412 aaPredicted RBP17.44■□□□□ 0.38
LSM4-201ENST00000252816 ARL3P36405 182 aa17.44■□□□□ 0.38
LSM4-201ENST00000252816 SP6Q3SY56 376 aa17.44■□□□□ 0.38
LSM4-201ENST00000252816 OR4A16Q8NH70 328 aa17.44■□□□□ 0.38
LSM4-201ENST00000252816 ZNF502Q8TBZ5 544 aa17.44■□□□□ 0.38
LSM4-201ENST00000252816 CXorf58Q96LI9 332 aa17.44■□□□□ 0.38
LSM4-201ENST00000252816 PEMTQ9UBM1 199 aa17.44■□□□□ 0.38
LSM4-201ENST00000252816 F11RQ9Y624 299 aaKnown RBP17.44■□□□□ 0.38
LSM4-201ENST00000252816 SMAD5-AS1Q9Y6J3 95 aa17.44■□□□□ 0.38
LSM4-201ENST00000252816 TRBV7-1A0A0A6YYK4 115 aa17.43■□□□□ 0.38
LSM4-201ENST00000252816 ANKRD20A5PA0PJZ0 165 aa17.43■□□□□ 0.38
LSM4-201ENST00000252816 DISC1C4P0D8 188 aa17.43■□□□□ 0.38
LSM4-201ENST00000252816 CLEC3BP05452 202 aa17.43■□□□□ 0.38
LSM4-201ENST00000252816 P0C879 139 aa17.43■□□□□ 0.38
LSM4-201ENST00000252816 EDN2P20800 178 aa17.43■□□□□ 0.38
LSM4-201ENST00000252816 MECP2P51608 486 aaKnown RBP17.43■□□□□ 0.38
LSM4-201ENST00000252816 SLC25A24Q6NUK1 477 aa17.43■□□□□ 0.38
LSM4-201ENST00000252816 CCDC71LQ8N9Z2 235 aa17.43■□□□□ 0.38
LSM4-201ENST00000252816 RTBDNQ9BSG5 229 aaPredicted RBP17.43■□□□□ 0.38
LSM4-201ENST00000252816 THYN1Q9P016 225 aa17.43■□□□□ 0.38
LSM4-201ENST00000252816 GPHB5Q86YW7 130 aa17.42■□□□□ 0.38
LSM4-201ENST00000252816 TMEM56Q96MV1 263 aa17.42■□□□□ 0.38
LSM4-201ENST00000252816 ZC4H2Q9NQZ6 224 aa17.42■□□□□ 0.38
LSM4-201ENST00000252816 IZUMO1RA6ND01 250 aa17.41■□□□□ 0.38
LSM4-201ENST00000252816 LGALS9O00182 355 aa17.41■□□□□ 0.38
LSM4-201ENST00000252816 UCP1P25874 307 aa17.41■□□□□ 0.38
LSM4-201ENST00000252816 GPR183P32249 361 aa17.41■□□□□ 0.38
LSM4-201ENST00000252816 Q8N1Y9 231 aa17.41■□□□□ 0.38
LSM4-201ENST00000252816 OR51S1Q8NGJ8 323 aa17.41■□□□□ 0.38
LSM4-201ENST00000252816 VN1R17PQ8TDU5 208 aa17.41■□□□□ 0.38
LSM4-201ENST00000252816 ASCL2Q99929 193 aa17.41■□□□□ 0.38
LSM4-201ENST00000252816 C5orf66Q9H5L9 145 aa17.41■□□□□ 0.38
LSM4-201ENST00000252816 C2orf70A6NJV1 201 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms