RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PIGBOS1A0A0B4J2F0 54 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 ANKRD34BA5PLL1 514 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 RBMY1BA6NDE4 496 aaKnown RBP10.54□□□□□ -0.72
DDX39A-201ENST00000242776 RBMY1EA6NEQ0 496 aaKnown RBP10.54□□□□□ -0.72
DDX39A-201ENST00000242776 INMT-MINDY4F8WBC2 141 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 RBFOX2O43251 390 aaKnown RBP eCLIP10.54□□□□□ -0.722e-7■■□□□ 14.5
DDX39A-201ENST00000242776 PRAF2O60831 178 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 DHFRP00374 187 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 IGLV1-51P01701 117 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 SERPINE2P07093 398 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 RBMY1DP0C7P1 496 aaKnown RBP10.54□□□□□ -0.72
DDX39A-201ENST00000242776 RPA2P15927 270 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 ANXA7P20073 488 aaKnown RBP10.54□□□□□ -0.72
DDX39A-201ENST00000242776 MECP2P51608 486 aaKnown RBP10.54□□□□□ -0.72
DDX39A-201ENST00000242776 DHODHQ02127 395 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 PLGLAQ15195 96 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 C4orf46Q504U0 113 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 OR2B11Q5JQS5 317 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 GALNT14Q96FL9 552 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 MARVELD1Q9BSK0 173 aa10.54□□□□□ -0.72
DDX39A-201ENST00000242776 A8MZ25 164 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 FCN1O00602 326 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 CRYZL1O95825 349 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 HPRT1P00492 218 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 HLA-AP01891 365 aaKnown RBP10.53□□□□□ -0.72
DDX39A-201ENST00000242776 OR5AC1P0C628 307 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 OR4E1P0C645 316 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 SRPXP78539 464 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 PPP1R1AQ13522 171 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 OXA1LQ15070 435 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 UNQ5815/PRO19632Q6UWF5 114 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 OSR1Q8TAX0 266 aaPredicted RBP10.53□□□□□ -0.72
DDX39A-201ENST00000242776 RNF5Q99942 180 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 AIFM2Q9BRQ8 373 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 GPN1Q9HCN4 374 aaPredicted RBP10.53□□□□□ -0.72
DDX39A-201ENST00000242776 COMMD9Q9P000 198 aa10.53□□□□□ -0.72
DDX39A-201ENST00000242776 SHOXO15266 292 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 ATG12O94817 140 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 SFT2D2O95562 160 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 LY6G6CO95867 125 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 UCP1P25874 307 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 LINC00205P59089 165 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 RPS16P62249 146 aaKnown RBP10.52□□□□□ -0.73
DDX39A-201ENST00000242776 CX3CL1P78423 397 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 DEFA5Q01523 94 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 TMEM177Q53S58 311 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 C19orf54Q5BKX5 351 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 LYG2Q86SG7 212 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 HARBI1Q96MB7 349 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 TP53RKQ96S44 253 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 PLEKHA2Q9HB19 425 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 PLEKHA3Q9HB20 300 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 ZNF355PQ9NSJ1 428 aa10.52□□□□□ -0.73
DDX39A-201ENST00000242776 HRASP01112 189 aa10.51□□□□□ -0.73
DDX39A-201ENST00000242776 TRGV3P03979 118 aa10.51□□□□□ -0.73
DDX39A-201ENST00000242776 IL5P05113 134 aa10.51□□□□□ -0.73
DDX39A-201ENST00000242776 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
DDX39A-201ENST00000242776 ERVK-16P61578 105 aa10.51□□□□□ -0.73
DDX39A-201ENST00000242776 SUPT4H1P63272 117 aaKnown RBP10.51□□□□□ -0.73
DDX39A-201ENST00000242776 GTSCR1Q86UQ5 136 aa10.51□□□□□ -0.73
DDX39A-201ENST00000242776 PPP1R27Q86WC6 154 aa10.51□□□□□ -0.73
DDX39A-201ENST00000242776 COQ8AQ8NI60 647 aa10.51□□□□□ -0.73
DDX39A-201ENST00000242776 TSNAXQ99598 290 aaKnown RBP10.51□□□□□ -0.73
DDX39A-201ENST00000242776 TMEM222Q9H0R3 208 aa10.51□□□□□ -0.73
DDX39A-201ENST00000242776 C9orf170A2RU37 121 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 IZUMO1RA6ND01 250 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 SLC25A17O43808 307 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 CREBL2O60519 120 aaPredicted RBP10.5□□□□□ -0.73
DDX39A-201ENST00000242776 S1PR2O95136 353 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 SPDEFO95238 335 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 IGKV1-16P04430 117 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 NQO2P16083 231 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 LPAR6P43657 344 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 LGALS7P47929 136 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 DHRS2Q13268 280 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 TMEM187Q14656 261 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 SP6Q3SY56 376 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 VMA21Q3ZAQ7 101 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 LGI3Q8N145 548 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 LFNGQ8NES3 379 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 NPBQ8NG41 125 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 IL17DQ8TAD2 202 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 IL22RA2Q969J5 263 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 RHOVQ96L33 236 aa10.5□□□□□ -0.73
DDX39A-201ENST00000242776 NDUFA3O95167 84 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 BRI3O95415 125 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 SYNJ2BPP57105 145 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 TMEM267Q0VDI3 215 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-201ENST00000242776 RNASE11Q8TAA1 199 aaKnown RBP10.49□□□□□ -0.73
DDX39A-201ENST00000242776 VSTM2AQ8TAG5 236 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 ZNF431Q8TF32 576 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-201ENST00000242776 GLYATL2Q8WU03 294 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 RBPMSQ93062 196 aaKnown RBP10.49□□□□□ -0.73
DDX39A-201ENST00000242776 PHB2Q99623 299 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 HIPK2Q9H2X6 1198 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 DUXBA0A1W2PPF3 345 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 MARCH11A6NNE9 402 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 SNRPGP15A8MWD9 76 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 RRHO14718 337 aa10.49□□□□□ -0.73
DDX39A-201ENST00000242776 CDS2O95674 445 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms