RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SPATA45Q537H7 98 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 WDR73Q6P4I2 378 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 C1orf229Q6ZS94 237 aaPredicted RBP12.77□□□□□ -0.37
DDX55-201ENST00000238146 SLC24A4Q8NFF2 622 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 KCNS1Q96KK3 526 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 IFI27L2Q9H2X8 130 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 SLC45A2Q9UMX9 530 aa12.77□□□□□ -0.37
DDX55-201ENST00000238146 COL27A1Q8IZC6 1860 aaPredicted RBP12.77□□□□□ -0.37
DDX55-201ENST00000238146 C15orf61A6NNL5 157 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 ZNF253O75346 499 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 PMCHP20382 165 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 ACP1P24666 158 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 ZNF83P51522 516 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 SUMO1P63165 101 aaKnown RBP12.76□□□□□ -0.37
DDX55-201ENST00000238146 RNFT1Q5M7Z0 435 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 INO80CQ6PI98 192 aaPredicted RBP12.76□□□□□ -0.37
DDX55-201ENST00000238146 GCNT2Q8N0V5 402 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 MDS2Q8NDY4 140 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 ZFP30Q9Y2G7 519 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 TIMM8AO60220 97 aaPredicted RBP12.76□□□□□ -0.37
DDX55-201ENST00000238146 AGFG2O95081 481 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 CA2P00918 260 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 TCL1AP56279 114 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 LOXL3P58215 753 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 DDB2Q92466 427 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 OSTCQ9NRP0 149 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 IL19Q9UHD0 177 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 PPIAL4AQ9Y536 164 aa12.76□□□□□ -0.37
DDX55-201ENST00000238146 FABP6P51161 128 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 ARG2P78540 354 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 RPL19P84098 196 aaKnown RBP12.75□□□□□ -0.37
DDX55-201ENST00000238146 LRRC29Q8WV35 223 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 STARD4Q96DR4 205 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 SLC35E1Q96K37 410 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 SLC25A10Q9UBX3 287 aaPredicted RBP12.75□□□□□ -0.37
DDX55-201ENST00000238146 CBY1Q9Y3M2 126 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 ARL2-SNX15V9GYD0 113 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 TRGV5A0A0B4J1U4 118 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 BMPR1BO00238 502 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 OR5G3P0C626 314 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 TDGF1P13385 188 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 UTF1Q5T230 341 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 IGLC2P0DOY2 106 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 IGLC3P0DOY3 106 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 SRIP30626 198 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 CHRNB4P30926 498 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 HSPE1P61604 102 aaKnown RBP12.75□□□□□ -0.37
DDX55-201ENST00000238146 C11orf42Q8N5U0 333 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 NEUROG1Q92886 237 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 ZNF503Q96F45 646 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 TMEM167BQ9NRX6 74 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 DUSP13Q9UII6 198 aa12.75□□□□□ -0.37
DDX55-201ENST00000238146 IGKV1D-17A0A075B6S4 117 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 SIAH2O43255 324 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 HYPMO75409 117 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 ZNF324O75467 553 aaPredicted RBP12.74□□□□□ -0.37
DDX55-201ENST00000238146 TIGITQ495A1 244 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 OR4A47Q6IF82 309 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 NIT1Q86X76 327 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 STPG4Q8N801 248 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 FAM216AQ8WUB2 273 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 NABP2Q9BQ15 211 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 TMEM14BQ9NUH8 114 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 UQCR10Q9UDW1 63 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 MMP23AO75900 390 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 IGLV2-8P01709 118 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 C3orf79P0CE67 100 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 MYOD1P15172 320 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 COX19Q49B96 90 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 MRPL54Q6P161 138 aaKnown RBP12.74□□□□□ -0.37
DDX55-201ENST00000238146 FAM214BQ7L5A3 538 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 OR4S2Q8NH73 311 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 FAM122AQ96E09 287 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 DNAJC4Q9NNZ3 241 aa12.74□□□□□ -0.37
DDX55-201ENST00000238146 FOXA2Q9Y261 457 aaPredicted RBP12.74□□□□□ -0.37
DDX55-201ENST00000238146 A0A1W2PNU3 283 aaPredicted RBP12.73□□□□□ -0.37
DDX55-201ENST00000238146 GGTLC3B5MD39 225 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 ISLRO14498 428 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 IGKV3-15P01624 115 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 KIR2DS2P43631 304 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 PRRX1P54821 245 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 F2RL2O00254 374 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 AMY1AP04745 511 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 CR1LQ2VPA4 569 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 MOB3BQ86TA1 216 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 FAM19A2Q8N3H0 131 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 ENY2Q9NPA8 101 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
DDX55-201ENST00000238146 SMIM27A0A1W2PRY6 76 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 DPRXA6NFQ7 191 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 NDUFB8O95169 186 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 HLA-DQA1P01909 254 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 REG1AP05451 166 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 Q6ZT83 130 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 CORO2AQ92828 525 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 LEAP2Q969E1 77 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 HINT2Q9BX68 163 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 TECRQ9NZ01 308 aaKnown RBP12.72□□□□□ -0.37
DDX55-201ENST00000238146 IGKV1OR2-108A0A075B7D4 117 aa12.72□□□□□ -0.37
DDX55-201ENST00000238146 MGST3O14880 152 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms