RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CXorf1O96002 111 aa13.18□□□□□ -0.3
UBE3D-201ENST00000237186 APOA2P02652 100 aa13.18□□□□□ -0.3
UBE3D-201ENST00000237186 CCL3L1P16619 93 aa13.18□□□□□ -0.3
UBE3D-201ENST00000237186 HCFC1P51610 2035 aa13.18□□□□□ -0.3
UBE3D-201ENST00000237186 B2MP61769 119 aa13.18□□□□□ -0.3
UBE3D-201ENST00000237186 C2orf83Q53S99 150 aa13.18□□□□□ -0.3
UBE3D-201ENST00000237186 SPNS3Q6ZMD2 512 aa13.18□□□□□ -0.3
UBE3D-201ENST00000237186 ANAPC16Q96DE5 110 aa13.18□□□□□ -0.3
UBE3D-201ENST00000237186 SSX3Q99909 188 aa13.18□□□□□ -0.3
UBE3D-201ENST00000237186 MRPL20Q9BYC9 149 aaKnown RBP13.18□□□□□ -0.3
UBE3D-201ENST00000237186 DOK5Q9P104 306 aa13.18□□□□□ -0.3
UBE3D-201ENST00000237186 A0A087X0M5 115 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 A0A1B0GX30 115 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 F6UZH7 168 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 SAA1P0DJI8 122 aaPredicted RBP13.17□□□□□ -0.3
UBE3D-201ENST00000237186 MYOD1P15172 320 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 APOBEC3AP31941 199 aaPredicted RBP13.17□□□□□ -0.3
UBE3D-201ENST00000237186 ZNF137PP52743 207 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 PRR20EP86478 221 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 PRR20CP86479 221 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 PRR20DP86480 221 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 PRR20BP86481 221 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 PRR20AP86496 221 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 LYPD2Q6UXB3 125 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 C16orf82Q7Z2V1 217 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 OR1L8Q8NGR8 309 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 NANPQ8TBE9 248 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 IGF2RP11717 2491 aa13.17□□□□□ -0.3
UBE3D-201ENST00000237186 B9A039 149 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 PHOX2AO14813 284 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST1H2BKO60814 126 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 TRGC2P03986 189 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 S100A9P06702 114 aaKnown RBP13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST1H2BJP06899 126 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST1H2BOP23527 126 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST1H2BBP33778 126 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 DLX6P56179 175 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST1H2BDP58876 126 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST1H2BCP62807 126 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST2H2BEQ16778 126 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.16□□□□□ -0.3
UBE3D-201ENST00000237186 TMEM144Q7Z5S9 345 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 STPG3Q8N7X2 389 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 ABHD5Q8WTS1 349 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST1H2BHQ93079 126 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 ST6GALNAC6Q969X2 333 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 TMEM186Q96B77 213 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST1H2BNQ99877 126 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 HIST1H2BMQ99879 126 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 DVL1O14640 695 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 ARL14EPLP0DKL9 152 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 CDX1P47902 265 aaPredicted RBP13.16□□□□□ -0.3
UBE3D-201ENST00000237186 GNB1P62873 340 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 S100A12P80511 92 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 OR51G1Q8NGK1 321 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 DYNLRB1Q9NP97 96 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 NDUFA4L2Q9NRX3 87 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 CTSZQ9UBR2 303 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 TANC2Q9HCD6 1990 aa13.16□□□□□ -0.3
UBE3D-201ENST00000237186 RAI1Q7Z5J4 1906 aaPredicted RBP13.15□□□□□ -0.3
UBE3D-201ENST00000237186 CLN5O75503 358 aa13.15□□□□□ -0.3
UBE3D-201ENST00000237186 LOXP28300 417 aaPredicted RBP13.15□□□□□ -0.3
UBE3D-201ENST00000237186 RHOBP62745 196 aa13.15□□□□□ -0.3
UBE3D-201ENST00000237186 TMEM155Q4W5P6 130 aa13.15□□□□□ -0.3
UBE3D-201ENST00000237186 PDPNQ86YL7 162 aa13.15□□□□□ -0.3
UBE3D-201ENST00000237186 OR4A5Q8NH83 315 aa13.15□□□□□ -0.3
UBE3D-201ENST00000237186 SSMEM1Q8WWF3 244 aa13.15□□□□□ -0.3
UBE3D-201ENST00000237186 HINT2Q9BX68 163 aa13.15□□□□□ -0.3
UBE3D-201ENST00000237186 SLC45A2Q9UMX9 530 aa13.15□□□□□ -0.3
UBE3D-201ENST00000237186 ZGRF1Q86YA3 2104 aa13.15□□□□□ -0.3
UBE3D-201ENST00000237186 H7BYZ3 331 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 FSTL3O95633 263 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 LINC00869P0C866 280 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 USF1P22415 310 aaPredicted RBP13.14□□□□□ -0.31
UBE3D-201ENST00000237186 ATP5G3P48201 142 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 FBXL19-AS1Q494R0 122 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 OR4C13Q8NGP0 309 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 TMEM167AQ8TBQ9 72 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 FLYWCH2Q96CP2 140 aaKnown RBP13.14□□□□□ -0.31
UBE3D-201ENST00000237186 HARBI1Q96MB7 349 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 NABP2Q9BQ15 211 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 PCGF1Q9BSM1 259 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 TMEM204Q9BSN7 226 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 SEPSECSQ9HD40 501 aaKnown RBP13.14□□□□□ -0.31
UBE3D-201ENST00000237186 RNASE2P10153 161 aaKnown RBP13.14□□□□□ -0.31
UBE3D-201ENST00000237186 CD99P14209 185 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 IGFBP2P18065 325 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 RPL8P62917 257 aaKnown RBP13.14□□□□□ -0.31
UBE3D-201ENST00000237186 CST9LP1Q5W188 147 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 H1FXQ92522 213 aaKnown RBP13.14□□□□□ -0.31
UBE3D-201ENST00000237186 SRD5A3Q9H8P0 318 aa13.14□□□□□ -0.31
UBE3D-201ENST00000237186 TET2Q6N021 2002 aaPredicted RBP13.13□□□□□ -0.31
UBE3D-201ENST00000237186 TRBV23-1A0A0A0MS06 115 aa13.13□□□□□ -0.31
UBE3D-201ENST00000237186 PCP4L1A6NKN8 68 aa13.13□□□□□ -0.31
UBE3D-201ENST00000237186 CD3EP07766 207 aa13.13□□□□□ -0.31
UBE3D-201ENST00000237186 S100PP25815 95 aa13.13□□□□□ -0.31
UBE3D-201ENST00000237186 PNKDQ8N490 385 aa13.13□□□□□ -0.31
UBE3D-201ENST00000237186 OR10X1Q8NGY0 326 aa13.13□□□□□ -0.31
UBE3D-201ENST00000237186 OR9G1Q8NH87 305 aa13.13□□□□□ -0.31
UBE3D-201ENST00000237186 VSTM2AQ8TAG5 236 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms