RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 MDP1Q86V88 176 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 ZNF114Q8NC26 417 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 NINJ1Q92982 152 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 DCAF16Q9NXF7 216 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 LSM4Q9Y4Z0 139 aaKnown RBP16.94■□□□□ 0.3
SNX3-201ENST00000230085 USF3Q68DE3 2245 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 FNDC10F2Z333 226 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 DLEU1O43261 78 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 ADH4P08319 380 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 TMEM183BQ1AE95 376 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 TREML4Q6UXN2 200 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 Q6ZWC4 215 aa16.94■□□□□ 0.3
SNX3-201ENST00000230085 PRR14LQ5THK1 2151 aa16.93■□□□□ 0.3
SNX3-201ENST00000230085 TRGV10A0A0A0MS01 117 aa16.93■□□□□ 0.3
SNX3-201ENST00000230085 VDAC2P45880 294 aaPredicted RBP16.93■□□□□ 0.3
SNX3-201ENST00000230085 CST9LP1Q5W188 147 aa16.93■□□□□ 0.3
SNX3-201ENST00000230085 DERL1Q9BUN8 251 aa16.93■□□□□ 0.3
SNX3-201ENST00000230085 GGTLC1Q9BX51 225 aa16.93■□□□□ 0.3
SNX3-201ENST00000230085 TUBG2Q9NRH3 451 aa16.93■□□□□ 0.3
SNX3-201ENST00000230085 MT-ND6P03923 174 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 LGALS4P56470 323 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 TGFBR3Q03167 851 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 COQ2Q96H96 371 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 GNB1LQ9BYB4 327 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 C16orf97H3BN30 126 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 CRYAAP02489 173 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 REG1AP05451 166 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 C22orf34Q6ZV56 151 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 OR52L2PQ8NGH6 319 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 OCC1Q8TAD7 63 aa16.92■□□□□ 0.3
SNX3-201ENST00000230085 TRAV38-1A0A0B4J264 116 aa16.91■□□□□ 0.3
SNX3-201ENST00000230085 LINC00473A8K010 186 aa16.91■□□□□ 0.3
SNX3-201ENST00000230085 MT-CO2P00403 227 aa16.91■□□□□ 0.3
SNX3-201ENST00000230085 ARL14EPLP0DKL9 152 aa16.91■□□□□ 0.3
SNX3-201ENST00000230085 CRISP2P16562 243 aa16.91■□□□□ 0.3
SNX3-201ENST00000230085 RPL19P84098 196 aaKnown RBP16.91■□□□□ 0.3
SNX3-201ENST00000230085 MGST2Q99735 147 aa16.91■□□□□ 0.3
SNX3-201ENST00000230085 ATG101Q9BSB4 218 aa16.91■□□□□ 0.3
SNX3-201ENST00000230085 USP9YO00507 2555 aaPredicted RBP16.91■□□□□ 0.3
SNX3-201ENST00000230085 CR1LQ2VPA4 569 aa16.9■□□□□ 0.3
SNX3-201ENST00000230085 BHLHA15Q7RTS1 189 aaPredicted RBP16.9■□□□□ 0.3
SNX3-201ENST00000230085 UBALD1Q8TB05 177 aa16.9■□□□□ 0.3
SNX3-201ENST00000230085 PSMG3-AS1Q96PY0 264 aa16.9■□□□□ 0.3
SNX3-201ENST00000230085 TMEM208Q9BTX3 173 aa16.9■□□□□ 0.3
SNX3-201ENST00000230085 C11orf53Q8IXP5 236 aa16.89■□□□□ 0.3
SNX3-201ENST00000230085 OR4B1Q8NGF8 309 aa16.89■□□□□ 0.3
SNX3-201ENST00000230085 SLC25A10Q9UBX3 287 aaPredicted RBP16.89■□□□□ 0.3
SNX3-201ENST00000230085 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.89■□□□□ 0.29
SNX3-201ENST00000230085 ZNF705FA8MVS1 300 aaPredicted RBP16.89■□□□□ 0.29
SNX3-201ENST00000230085 C3orf80F5H4A9 247 aa16.89■□□□□ 0.29
SNX3-201ENST00000230085 C15orf65H3BRN8 121 aa16.89■□□□□ 0.29
SNX3-201ENST00000230085 ZNF705DP0CH99 300 aaPredicted RBP16.89■□□□□ 0.29
SNX3-201ENST00000230085 ZNF705BP0CI00 300 aaPredicted RBP16.89■□□□□ 0.29
SNX3-201ENST00000230085 GCHFRP30047 84 aa16.89■□□□□ 0.29
SNX3-201ENST00000230085 DUTP33316 252 aaKnown RBP16.89■□□□□ 0.29
SNX3-201ENST00000230085 KIR2DS2P43631 304 aa16.89■□□□□ 0.29
SNX3-201ENST00000230085 COMPP49747 757 aaPredicted RBP16.89■□□□□ 0.29
SNX3-201ENST00000230085 ACP7Q6ZNF0 438 aa16.89■□□□□ 0.29
SNX3-201ENST00000230085 OR5AU1Q8NGC0 362 aa16.89■□□□□ 0.29
SNX3-201ENST00000230085 LINC01560Q8TB33 94 aa16.89■□□□□ 0.29
SNX3-201ENST00000230085 MRPL18Q9H0U6 180 aaKnown RBP16.89■□□□□ 0.29
SNX3-201ENST00000230085 SCO2A0A1W2PP80 73 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 ITGB1BP1O14713 200 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 OR9G9P0C7N8 305 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 ZNF25P17030 456 aaPredicted RBP16.88■□□□□ 0.29
SNX3-201ENST00000230085 UBE2G2P60604 165 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 ZNF90Q03938 601 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 GCSAMLQ5JQS6 135 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 OR10J3Q5JRS4 329 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 WDR73Q6P4I2 378 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 SDSLQ96GA7 329 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 WFIKKN1Q96NZ8 548 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 RBM14Q96PK6 669 aaKnown RBP16.88■□□□□ 0.29
SNX3-201ENST00000230085 OR2J1Q9GZK6 312 aa16.88■□□□□ 0.29
SNX3-201ENST00000230085 YLPM1P49750 1951 aaKnown RBP16.88■□□□□ 0.29
SNX3-201ENST00000230085 IGFBP2P18065 325 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 EGR1P18146 543 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 RPL29P47914 159 aaKnown RBP16.87■□□□□ 0.29
SNX3-201ENST00000230085 EDDM3BP56851 147 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 RHOBP62745 196 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 TOMM20LQ6UXN7 152 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 UHRF2Q96PU4 802 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 NPVFQ9HCQ7 196 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 GOLT1BQ9Y3E0 138 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 DOCK11Q5JSL3 2073 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 A0A1B0GUS0 222 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 SERF1AO75920 110 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 DEFA4P12838 97 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 BRS3P32247 399 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 TCF23Q7RTU1 214 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 OR5T1Q8NG75 326 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 EAF1Q96JC9 268 aaPredicted RBP16.87■□□□□ 0.29
SNX3-201ENST00000230085 RNF2Q99496 336 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 CXXC4Q9H2H0 198 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 MS4A5Q9H3V2 200 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 JPT1Q9UK76 154 aa16.87■□□□□ 0.29
SNX3-201ENST00000230085 YTHDF2Q9Y5A9 579 aaKnown RBP16.87■□□□□ 0.29
SNX3-201ENST00000230085 PKDREJQ9NTG1 2253 aa16.86■□□□□ 0.29
SNX3-201ENST00000230085 K7EN84 100 aa16.86■□□□□ 0.29
SNX3-201ENST00000230085 SPINT2O43291 252 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms