RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 ADORA2A-AS1P86434 159 aa13.76□□□□□ -0.21
GAPDH-201ENST00000229239 TREML4Q6UXN2 200 aa13.76□□□□□ -0.21
GAPDH-201ENST00000229239 OR5AN1Q8NGI8 311 aa13.76□□□□□ -0.21
GAPDH-201ENST00000229239 VSTM2AQ8TAG5 236 aa13.76□□□□□ -0.21
GAPDH-201ENST00000229239 PCGF1Q9BSM1 259 aa13.76□□□□□ -0.21
GAPDH-201ENST00000229239 PLEKHA3Q9HB20 300 aa13.76□□□□□ -0.21
GAPDH-201ENST00000229239 A0A1W2PPE2 198 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 A0A1W2PPV4 95 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 DVL1O14640 695 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 ZNF137PP52743 207 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 TMEM177Q53S58 311 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 PDPNQ86YL7 162 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 ABHD12Q8N2K0 398 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 FAM24BQ8N5W8 94 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 H1FXQ92522 213 aaKnown RBP13.75□□□□□ -0.21
GAPDH-201ENST00000229239 TNFRSF14Q92956 283 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 YPEL4Q96NS1 127 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 LSM4Q9Y4Z0 139 aaKnown RBP13.75□□□□□ -0.21
GAPDH-201ENST00000229239 DOCK11Q5JSL3 2073 aa13.75□□□□□ -0.21
GAPDH-201ENST00000229239 TEX15Q9BXT5 2789 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 INS-IGF2F8WCM5 200 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 J3QR06 171 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 TGOLN2O43493 480 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 FCN3O75636 299 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 CCL3L1P16619 93 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 IL3RAP26951 378 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 LOXP28300 417 aaPredicted RBP13.74□□□□□ -0.21
GAPDH-201ENST00000229239 TMEM155Q4W5P6 130 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 TEPPQ6URK8 271 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 LYPD2Q6UXB3 125 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 NANPQ8TBE9 248 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 TMEM170AQ8WVE7 144 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 ISOC2Q96AB3 205 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 SAV1Q9H4B6 383 aaPredicted RBP13.74□□□□□ -0.21
GAPDH-201ENST00000229239 SDF2L1Q9HCN8 221 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 CTSZQ9UBR2 303 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 NAT8Q9UHE5 227 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 ZNF727A8MUV8 499 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 DLX6P56179 175 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 HABP2Q14520 560 aaPredicted RBP13.74□□□□□ -0.21
GAPDH-201ENST00000229239 WDR25Q64LD2 544 aaPredicted RBP13.74□□□□□ -0.21
GAPDH-201ENST00000229239 CYP2G1PQ6ZSU1 146 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 OR9G1Q8NH87 305 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 NEUROG1Q92886 237 aa13.74□□□□□ -0.21
GAPDH-201ENST00000229239 NOTCH2Q04721 2471 aa13.73□□□□□ -0.21
GAPDH-201ENST00000229239 H0YJW9 148 aa13.73□□□□□ -0.21
GAPDH-201ENST00000229239 MC5RP33032 325 aa13.73□□□□□ -0.21
GAPDH-201ENST00000229239 CD81P60033 236 aa13.73□□□□□ -0.21
GAPDH-201ENST00000229239 OR4C13Q8NGP0 309 aa13.73□□□□□ -0.21
GAPDH-201ENST00000229239 OR10X1Q8NGY0 326 aa13.73□□□□□ -0.21
GAPDH-201ENST00000229239 FLYWCH2Q96CP2 140 aaKnown RBP13.73□□□□□ -0.21
GAPDH-201ENST00000229239 GGTLC1Q9BX51 225 aa13.73□□□□□ -0.21
GAPDH-201ENST00000229239 MRPL20Q9BYC9 149 aaKnown RBP13.73□□□□□ -0.21
GAPDH-201ENST00000229239 PDE6DO43924 150 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 IGKV1-16P04430 117 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 S100A6P06703 90 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 USF1P22415 310 aaPredicted RBP13.72□□□□□ -0.21
GAPDH-201ENST00000229239 RPL29P47914 159 aaKnown RBP13.72□□□□□ -0.21
GAPDH-201ENST00000229239 HNF4GQ14541 408 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 TMEM241Q24JQ0 296 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 C2orf83Q53S99 150 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 OR1L8Q8NGR8 309 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 MGST2Q99735 147 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 FAM90A27PA6NNH2 459 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 CLDN34H7C241 214 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 CA2P00918 260 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 PPOXP50336 477 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 SMIM7Q9BQ49 75 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 PXMP4Q9Y6I8 212 aa13.72□□□□□ -0.21
GAPDH-201ENST00000229239 A0A1W2PN81 502 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 SRRM4A7MD48 611 aaKnown RBP13.71□□□□□ -0.21
GAPDH-201ENST00000229239 VENTXO95231 258 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 CXorf1O96002 111 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 RBP4P02753 201 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 SAA1P0DJI8 122 aaPredicted RBP13.71□□□□□ -0.21
GAPDH-201ENST00000229239 CHRNA7P36544 502 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 RND2P52198 227 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 ZNF672Q499Z4 452 aaPredicted RBP13.71□□□□□ -0.21
GAPDH-201ENST00000229239 MUC15Q8N387 334 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 LINC01560Q8TB33 94 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 ST6GALNAC6Q969X2 333 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 HARBI1Q96MB7 349 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 COMMD5Q9GZQ3 224 aa13.71□□□□□ -0.21
GAPDH-201ENST00000229239 TEX50A0A1B0GTY4 177 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 F6UZH7 168 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 CDSNQ15517 529 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 BSXQ3C1V8 233 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 TMEM167AQ8TBQ9 72 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 CACNG8Q8WXS5 425 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 NABP2Q9BQ15 211 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 TMEM204Q9BSN7 226 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 C19orf24Q9BVV8 132 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 WASHC3Q9Y3C0 194 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 YIF1AO95070 293 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 MT-CO2P00403 227 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 OPN1MWP04001 364 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 STAG3L2P0CL84 134 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 STAG3L3P0CL85 134 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 OPN1MW2P0DN77 364 aa13.7□□□□□ -0.22
GAPDH-201ENST00000229239 OPN1MW3P0DN78 364 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms