RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 IL19Q9UHD0 177 aa12.73□□□□□ -0.37
VTN-201ENST00000226218 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
VTN-201ENST00000226218 DPRXA6NFQ7 191 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 FNDC10F2Z333 226 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 IGFBP2P18065 325 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 HNRNPA3P51991 378 aaKnown RBP12.72□□□□□ -0.37
VTN-201ENST00000226218 ANKRD39Q53RE8 183 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 Q6ZN92 141 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 C19orf35Q6ZS72 473 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 GCNT2Q8N0V5 402 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 CD177Q8N6Q3 437 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 CXXC4Q9H2H0 198 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 TMEM167BQ9NRX6 74 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 JPT1Q9UK76 154 aa12.72□□□□□ -0.37
VTN-201ENST00000226218 M0R1X1 148 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 CCL25O15444 150 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 SPINK4O60575 86 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 TOMM40O96008 361 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 CA2P00918 260 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 NPY1RP25929 384 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 ERVK-16P61578 105 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 RPL39P5Q59GN2 51 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 ABHD17BQ5VST6 288 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 FAM214BQ7L5A3 538 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 SLC24A4Q8NFF2 622 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 IFI27L2Q9H2X8 130 aa12.71□□□□□ -0.37
VTN-201ENST00000226218 FXYD3Q14802 87 aa12.71□□□□□ -0.38
VTN-201ENST00000226218 CR1LQ2VPA4 569 aa12.71□□□□□ -0.38
VTN-201ENST00000226218 C1orf229Q6ZS94 237 aaPredicted RBP12.71□□□□□ -0.38
VTN-201ENST00000226218 TXN2Q99757 166 aa12.71□□□□□ -0.38
VTN-201ENST00000226218 MRPL27Q9P0M9 148 aaKnown RBP12.71□□□□□ -0.38
VTN-201ENST00000226218 MRPS16Q9Y3D3 137 aaKnown RBP12.71□□□□□ -0.38
VTN-201ENST00000226218 FRYLO94915 3013 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.7□□□□□ -0.38
VTN-201ENST00000226218 CFIP05156 583 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 ZNF134P52741 427 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 LOXL3P58215 753 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 PSG5Q15238 335 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 LTC4SQ16873 150 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 ZNF439Q8NDP4 499 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 SPRY4Q9C004 299 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 FOXA2Q9Y261 457 aaPredicted RBP12.7□□□□□ -0.38
VTN-201ENST00000226218 GGTLC3B5MD39 225 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 IGHV1-2P23083 117 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 TSPOP30536 169 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 KIR2DS2P43631 304 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 SLC35B1P78383 322 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 RAB31Q13636 194 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 SMIM21Q3B7S5 101 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 TIGITQ495A1 244 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 FAM19A2Q8N3H0 131 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 KLHDC1Q8N7A1 406 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 C18orf32Q8TCD1 76 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 WIPF2Q8TF74 440 aaPredicted RBP12.7□□□□□ -0.38
VTN-201ENST00000226218 FAM234AQ9H0X4 552 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 TMEM14BQ9NUH8 114 aa12.7□□□□□ -0.38
VTN-201ENST00000226218 C20orf202A1L168 122 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 IZUMO1RA6ND01 250 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 PATE3B3GLJ2 98 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 PPOXP50336 477 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 TCL1AP56279 114 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 RBX1P62877 108 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 RNASE8Q8TDE3 154 aaKnown RBP12.69□□□□□ -0.38
VTN-201ENST00000226218 PLPPR2Q96GM1 343 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 S1PR3Q99500 378 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 NABP2Q9BQ15 211 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 CLEC7AQ9BXN2 247 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 WNT10AQ9GZT5 417 aa12.69□□□□□ -0.38
VTN-201ENST00000226218 IGHV2-26A0A0B4J1V2 119 aa12.68□□□□□ -0.38
VTN-201ENST00000226218 NKX6-3A6NJ46 265 aa12.68□□□□□ -0.38
VTN-201ENST00000226218 F2RL2O00254 374 aa12.68□□□□□ -0.38
VTN-201ENST00000226218 ACTL6BO94805 426 aa12.68□□□□□ -0.38
VTN-201ENST00000226218 MEOX1P50221 254 aa12.68□□□□□ -0.38
VTN-201ENST00000226218 KLF3P57682 345 aaPredicted RBP12.68□□□□□ -0.38
VTN-201ENST00000226218 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
VTN-201ENST00000226218 IBA57Q5T440 356 aaKnown RBP12.68□□□□□ -0.38
VTN-201ENST00000226218 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
VTN-201ENST00000226218 MRPL54Q6P161 138 aaKnown RBP12.68□□□□□ -0.38
VTN-201ENST00000226218 SELENOVP59797 346 aa12.68□□□□□ -0.38
VTN-201ENST00000226218 SLAQ13239 276 aa12.68□□□□□ -0.38
VTN-201ENST00000226218 PNKDQ8N490 385 aa12.68□□□□□ -0.38
VTN-201ENST00000226218 CORO2AQ92828 525 aa12.68□□□□□ -0.38
VTN-201ENST00000226218 TECRQ9NZ01 308 aaKnown RBP12.68□□□□□ -0.38
VTN-201ENST00000226218 GNG12Q9UBI6 72 aa12.68□□□□□ -0.38
VTN-201ENST00000226218 TNRC18O15417 2968 aaPredicted RBP12.67□□□□□ -0.38
VTN-201ENST00000226218 IGKV1OR2-108A0A075B7D4 117 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 APCSP02743 223 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 EDDM3AQ14507 147 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 PMCHL1Q16048 86 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 MAJINQ3KP22 176 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 OR4A47Q6IF82 309 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 RASL11AQ6T310 242 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 OR5B3Q8NH48 314 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 MBD6Q96DN6 1003 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 COMMD5Q9GZQ3 224 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 SPRR3Q9UBC9 169 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 A0A1W2PRE2 83 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
VTN-201ENST00000226218 INO80CQ6PI98 192 aaPredicted RBP12.67□□□□□ -0.38
VTN-201ENST00000226218 OR4S2Q8NH73 311 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms