RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 TMEM56Q96MV1 263 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 MS4A10Q96PG2 267 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 QTRT1Q9BXR0 403 aaKnown RBP16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 PRNDQ9UKY0 176 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 TMEM56-RWDD3S4R434 201 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 FBN3Q75N90 2809 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 A0A0G2JRQ6 117 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 AREGP15514 252 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 PPP1R1AQ13522 171 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 C4orf46Q504U0 113 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 C8orf86Q6ZUL3 223 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 SELENOHQ8IZQ5 122 aaKnown RBP16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 ZNF491Q8N8L2 437 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 OR4F17Q8NGA8 305 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 UBE2E2Q96LR5 201 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 OR4F4Q96R69 305 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 SLA2Q9H6Q3 261 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 COA4Q9NYJ1 87 aa16.92■□□□□ 0.3
SLC25A39-201ENST00000225308 TEX50A0A1B0GTY4 177 aa16.91■□□□□ 0.3
SLC25A39-201ENST00000225308 IGLC7A0M8Q6 106 aa16.91■□□□□ 0.3
SLC25A39-201ENST00000225308 H3BUA1 57 aa16.91■□□□□ 0.3
SLC25A39-201ENST00000225308 ATG12O94817 140 aa16.91■□□□□ 0.3
SLC25A39-201ENST00000225308 VAMP1P23763 118 aa16.91■□□□□ 0.3
SLC25A39-201ENST00000225308 TMEM268Q5VZI3 342 aa16.91■□□□□ 0.3
SLC25A39-201ENST00000225308 TTC9CQ8N5M4 171 aa16.91■□□□□ 0.3
SLC25A39-201ENST00000225308 OR51B2Q9Y5P1 312 aa16.91■□□□□ 0.3
SLC25A39-201ENST00000225308 NUDT19A8MXV4 375 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 PRAF2O60831 178 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 BRI3O95415 125 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 TPPP2P59282 170 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 TREML4Q6UXN2 200 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 OR10W1Q8NGF6 305 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 OR1L8Q8NGR8 309 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 OR5B3Q8NH48 314 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 RRNAD1Q96FB5 475 aaKnown RBP16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 GNB4Q9HAV0 340 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 NDUFA4L2Q9NRX3 87 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 ZNF355PQ9NSJ1 428 aa16.9■□□□□ 0.3
SLC25A39-201ENST00000225308 A0A0B4J293 547 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 HLA-AP01891 365 aaKnown RBP16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 TRGV3P03979 118 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 IL5P05113 134 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 ANXA3P12429 323 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 DHRS2Q13268 280 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 C19orf35Q6ZS72 473 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 SLC35G3Q8N808 338 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 OR4A16Q8NH70 328 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 C4orf3Q8WVX3 66 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 IL22RA2Q969J5 263 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 FKBP11Q9NYL4 201 aa16.89■□□□□ 0.29
SLC25A39-201ENST00000225308 C9orf170A2RU37 121 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 NPIPB5A8MRT5 1133 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 RBMXL2O75526 392 aaKnown RBP16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 SFT2D2O95562 160 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 PRH1P02810 166 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 TATDN3Q17R31 274 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 DEFB136Q30KP8 78 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 ETV3LQ6ZN32 361 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 LYG2Q86SG7 212 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 ZNF429Q86V71 674 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 OR52B4Q8NGK2 314 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 SRSF8Q9BRL6 282 aaKnown RBP16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 SEC22CQ9BRL7 303 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 ZNF257Q9Y2Q1 563 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 TRAPPC2P0DI81 140 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 TRAPPC2BP0DI82 140 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 CTRB1P17538 263 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 PSMB6P28072 239 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 WT1-ASQ06250 92 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 CTRB2Q6GPI1 263 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 THOC7Q6I9Y2 204 aaKnown RBP16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 Q6ZRM9 215 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 FAM219AQ8IW50 185 aa16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 RNASE11Q8TAA1 199 aaKnown RBP16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 GPN1Q9HCN4 374 aaPredicted RBP16.88■□□□□ 0.29
SLC25A39-201ENST00000225308 I3L521 148 aa16.87■□□□□ 0.29
SLC25A39-201ENST00000225308 REG1AP05451 166 aa16.87■□□□□ 0.29
SLC25A39-201ENST00000225308 CRYGCP07315 174 aa16.87■□□□□ 0.29
SLC25A39-201ENST00000225308 DEFA5Q01523 94 aa16.87■□□□□ 0.29
SLC25A39-201ENST00000225308 ANKRD55Q3KP44 614 aa16.87■□□□□ 0.29
SLC25A39-201ENST00000225308 OR5B12Q96R08 314 aa16.87■□□□□ 0.29
SLC25A39-201ENST00000225308 HINT2Q9BX68 163 aa16.87■□□□□ 0.29
SLC25A39-201ENST00000225308 TRBV9A0A0B4J1U6 114 aa16.86■□□□□ 0.29
SLC25A39-201ENST00000225308 A0A0B4J2A0 478 aa16.86■□□□□ 0.29
SLC25A39-201ENST00000225308 SRPXP78539 464 aa16.86■□□□□ 0.29
SLC25A39-201ENST00000225308 Q6ZNX1 250 aa16.86■□□□□ 0.29
SLC25A39-201ENST00000225308 LYZL2Q7Z4W2 148 aa16.86■□□□□ 0.29
SLC25A39-201ENST00000225308 LGI3Q8N145 548 aa16.86■□□□□ 0.29
SLC25A39-201ENST00000225308 ZNF431Q8TF32 576 aaPredicted RBP16.86■□□□□ 0.29
SLC25A39-201ENST00000225308 LSM10Q969L4 123 aaKnown RBP16.86■□□□□ 0.29
SLC25A39-201ENST00000225308 RAX2Q96IS3 184 aa16.86■□□□□ 0.29
SLC25A39-201ENST00000225308 SHPKQ9UHJ6 478 aa16.86■□□□□ 0.29
SLC25A39-201ENST00000225308 DUS4LO95620 317 aaKnown RBP16.85■□□□□ 0.29
SLC25A39-201ENST00000225308 RUNX1Q01196 453 aa16.85■□□□□ 0.29
SLC25A39-201ENST00000225308 NMSQ5H8A3 153 aa16.85■□□□□ 0.29
SLC25A39-201ENST00000225308 DUX3Q96PT4 197 aa16.85■□□□□ 0.29
SLC25A39-201ENST00000225308 ALG5Q9Y673 324 aa16.85■□□□□ 0.29
SLC25A39-201ENST00000225308 ST8SIA3O43173 380 aa16.85■□□□□ 0.29
SLC25A39-201ENST00000225308 IGHV3-11P01762 117 aa16.85■□□□□ 0.29
SLC25A39-201ENST00000225308 OR13C7P0DN81 318 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms