RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TMEM14BQ9NUH8 114 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 DKK4Q9UBT3 224 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 FOXA2Q9Y261 457 aaPredicted RBP14.18□□□□□ -0.14
USB1-201ENST00000219281 MUC6Q6W4X9 2439 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 SPRY3O43610 288 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 CGAP01215 116 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 RPL29P47914 159 aaKnown RBP14.18□□□□□ -0.14
USB1-201ENST00000219281 RAB7AP51149 207 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 RAB31Q13636 194 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 MIR17HGQ75NE6 70 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 FAM122AQ96E09 287 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 IDI2-AS1Q9NZ38 188 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 TP53TG3Q9ULZ0 132 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 SLC25A15Q9Y619 301 aa14.18□□□□□ -0.14
USB1-201ENST00000219281 ZNF705FA8MVS1 300 aaPredicted RBP14.17□□□□□ -0.14
USB1-201ENST00000219281 ZNF705DP0CH99 300 aaPredicted RBP14.17□□□□□ -0.14
USB1-201ENST00000219281 ZNF705BP0CI00 300 aaPredicted RBP14.17□□□□□ -0.14
USB1-201ENST00000219281 CGB3P0DN86 165 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 CGB7P0DN87 165 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 CFHR2P36980 270 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 VHLLQ6RSH7 139 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 UHRF2Q96PU4 802 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 MRPL18Q9H0U6 180 aaKnown RBP14.17□□□□□ -0.14
USB1-201ENST00000219281 DCHS1Q96JQ0 3298 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 TRGV10A0A0A0MS01 117 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 CD33P20138 364 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 OR10J1P30954 320 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 OR5I1Q13606 314 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 C1orf194Q5T5A4 169 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 DUX4L9Q6RFH8 374 aaPredicted RBP14.17□□□□□ -0.14
USB1-201ENST00000219281 C1orf174Q8IYL3 243 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 LYG1Q8N1E2 194 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 C11orf52Q96A22 123 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 EAF1Q96JC9 268 aaPredicted RBP14.17□□□□□ -0.14
USB1-201ENST00000219281 CBLN4Q9NTU7 201 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 CACNA1GO43497 2377 aa14.17□□□□□ -0.14
USB1-201ENST00000219281 M0R1B8 84 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 NBL1P41271 181 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 ERVFC1-1P60608 527 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 SELENOTP62341 195 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 MRPS11P82912 194 aaKnown RBP14.16□□□□□ -0.14
USB1-201ENST00000219281 PRR20EP86478 221 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 PRR20CP86479 221 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 PRR20DP86480 221 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 PRR20BP86481 221 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 PRR20AP86496 221 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 OR1L6Q8NGR2 347 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 ITLN1Q8WWA0 313 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 OR51B2Q9Y5P1 312 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 A8MXE2 369 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 C9JCJ5 164 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 LHBP01229 141 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 FRMD6-AS1P0C7T7 363 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 LINC00869P0C866 280 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 TBX15Q96SF7 602 aa14.16□□□□□ -0.14
USB1-201ENST00000219281 NBEAQ8NFP9 2946 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 KBTBD11-OT1A0A1B0GTJ5 212 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 AHRRA9YTQ3 701 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 ITGB1BP1O14713 200 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 CRISP2P16562 243 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 GNG10P50151 68 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 LGALS4P56470 323 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 LINC00310P59036 64 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 PSG5Q15238 335 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 KRTCAP3Q53RY4 240 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 SEM1Q6ZVN7 128 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 ZCCHC14Q8WYQ9 949 aaKnown RBP14.15□□□□□ -0.14
USB1-201ENST00000219281 NEUROG1Q92886 237 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 LRFN3Q9BTN0 628 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 SNHG12Q9BXW3 62 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 INTS1Q8N201 2190 aaKnown RBP14.15□□□□□ -0.14
USB1-201ENST00000219281 BSNQ9UPA5 3926 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 PTPRZ1P23471 2315 aaPredicted RBP14.15□□□□□ -0.14
USB1-201ENST00000219281 TRAV9-1A0A075B6T8 112 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 IER3P46695 156 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 NUTF2P61970 127 aaKnown RBP14.15□□□□□ -0.14
USB1-201ENST00000219281 RPEL1Q2QD12 228 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 MOB3BQ86TA1 216 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 ZADH2Q8N4Q0 377 aa14.15□□□□□ -0.14
USB1-201ENST00000219281 HEATR1Q9H583 2144 aaKnown RBP14.14□□□□□ -0.15
USB1-201ENST00000219281 KIR2DL5BA0A0G2JN68 375 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 KIR2DL5BA0A0G2JPC4 375 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 FCN1O00602 326 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 SERF1AO75920 110 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 AREGP15514 252 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 CRYBB3P26998 211 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 KLF3P57682 345 aaPredicted RBP14.14□□□□□ -0.15
USB1-201ENST00000219281 TPPP2P59282 170 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 IGFL3Q6UXB1 125 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 Q6ZWC4 215 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 MMD2Q8IY49 270 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 KIR2DL5AQ8N109 375 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.14□□□□□ -0.15
USB1-201ENST00000219281 ATG101Q9BSB4 218 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 LY96Q9Y6Y9 160 aa14.14□□□□□ -0.15
USB1-201ENST00000219281 J3QR06 171 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 K7EM74 188 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 TCAPO15273 167 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 CORO2AQ92828 525 aa14.13□□□□□ -0.15
USB1-201ENST00000219281 NABP2Q9BQ15 211 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms