RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ZG16O60844 167 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 LINC01555Q8NAE3 123 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 MYEOVQ96EZ4 313 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 MARS2Q96GW9 593 aaKnown RBP12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 IDI2-AS1Q9NZ38 188 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 ZNF415Q09FC8 603 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 FUT5Q11128 374 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 HIGD1CA8MV81 97 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 DNM1P46Q6ZS02 220 aa12.52□□□□□ -0.4
SPTLC2-201ENST00000216484 OR9G4Q8NGQ1 327 aa12.52□□□□□ -0.4
SPTLC2-201ENST00000216484 CLEC7AQ9BXN2 247 aa12.52□□□□□ -0.4
SPTLC2-201ENST00000216484 STRCQ7RTU9 1775 aa12.52□□□□□ -0.4
SPTLC2-201ENST00000216484 FBLN7Q53RD9 439 aa12.52□□□□□ -0.4
SPTLC2-201ENST00000216484 EVI2AP22794 236 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 ZNF818PQ6ZRF7 136 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 FMC1Q96HJ9 113 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 ACACAQ13085 2346 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 ZNHIT1O43257 154 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 GPX4P36969 197 aaPredicted RBP12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 ATG4DQ86TL0 474 aaPredicted RBP12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 NPIPB11E5RHQ5 1161 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 ITGB1BP1O14713 200 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 ZFP36L2P47974 494 aaKnown RBP12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 LINC00518Q8N0U6 118 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 IMMP2LQ96T52 175 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 C21orf140B9A014 251 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 MIXL1Q9H2W2 232 aa12.52□□□□□ -0.41
SPTLC2-201ENST00000216484 VWC2LB2RUY7 222 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 ZNF146Q15072 292 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 MRPL52Q86TS9 123 aaKnown RBP12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 UBE2DNLQ8IWF7 75 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 FXYD1O00168 92 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 MGST3O14880 152 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 LIFP15018 202 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 GAGE13Q4V321 117 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 MBD1Q9UIS9 605 aaPredicted RBP12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 ZNF826PQ6ZT77 177 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 ITLN1Q8WWA0 313 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 PGLYRP1O75594 196 aaPredicted RBP12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 TMPRSS3P57727 454 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 SEPSECSQ9HD40 501 aaKnown RBP12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 GREB1LQ9C091 1923 aaPredicted RBP12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 EGR1P18146 543 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 VAX1Q5SQQ9 334 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 SELENOHQ8IZQ5 122 aaKnown RBP12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 TMEM174Q8WUU8 243 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 Q6ZNB5 142 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 DTX2Q86UW9 622 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 C1orf162Q8NEQ5 155 aaPredicted RBP12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 NPIPB3Q92617 1050 aa12.51□□□□□ -0.41
SPTLC2-201ENST00000216484 SAMD5Q5TGI4 173 aa12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 ADARB2-AS1A8MUL3 147 aa12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 FOXA2Q9Y261 457 aaPredicted RBP12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 OR11H4Q8NGC9 324 aa12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 SERGEFQ9UGK8 458 aa12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 HRKO00198 91 aa12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 DPM2O94777 84 aa12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 FER1L6-AS1Q8NA97 138 aa12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 PRTN3P24158 256 aa12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 CYP2G1PQ6ZSU1 146 aa12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 HIST1H2BAQ96A08 127 aa12.5□□□□□ -0.41
SPTLC2-201ENST00000216484 GTSCR1Q86UQ5 136 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 IL36BQ9NZH7 164 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 EPDR1Q9UM22 224 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 FHITP49789 147 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 ST20Q9HBF5 79 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 DLEC1Q9Y238 1755 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 PSCAO43653 123 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 GCHFRP30047 84 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 ZNF625Q96I27 306 aaPredicted RBP12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 ZNF79Q15937 498 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 NPCDR1Q9BY65 106 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 QSER1Q2KHR3 1735 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 IGKV1D-42A0A075B6H8 117 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 IGHV5-10-1A0A0J9YXX1 117 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 ODAMA1E959 279 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 F8WEM9 126 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 CGAP01215 116 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 FAM60AQ9NP50 221 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 SBF1O95248 1867 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 HSPE1P61604 102 aaKnown RBP12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 APCDD1LQ8NCL9 501 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 GSN-AS1Q9NRJ2 163 aa12.49□□□□□ -0.41
SPTLC2-201ENST00000216484 NBEAP1P0C6P0 100 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 PAX1P15863 534 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 TRAV5A0A0B4J249 113 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 TRGV4A0A0C4DH28 118 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 CD28P10747 220 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 ZNF660Q6AZW8 331 aaPredicted RBP12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 GGTLC1Q9BX51 225 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 TMEM30AQ9NV96 361 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 C2orf16Q68DN1 1984 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 KBTBD11-OT1A0A1B0GTJ5 212 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 SCO2A0A1W2PP80 73 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 ERG28Q9UKR5 140 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 SIGLEC1Q9BZZ2 1709 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 DANCRP0C864 163 aa12.48□□□□□ -0.41
SPTLC2-201ENST00000216484 TCF20Q9UGU0 1960 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms