RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TRAPPC2BP0DI82 140 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 GPR183P32249 361 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 FXYD4P59646 89 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 WT1-ASQ06250 92 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 PLET1Q6UQ28 207 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 WFDC3Q8IUB2 231 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 OR10W1Q8NGF6 305 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 OR51H1Q8NH63 302 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 OVOL2Q9BRP0 275 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 NDUFA4L2Q9NRX3 87 aa11.85□□□□□ -0.51
ERCC1-201ENST00000013807 LOC102724200A0A096LPH7 203 aaPredicted RBP11.84□□□□□ -0.51
ERCC1-201ENST00000013807 MARCH11A6NNE9 402 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 TGOLN2O43493 480 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 PGLYRP1O75594 196 aaPredicted RBP11.84□□□□□ -0.51
ERCC1-201ENST00000013807 JTBO76095 146 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 RFX2P48378 723 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 ZNF585BQ52M93 769 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 AADACL3Q5VUY0 350 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 SPSB3Q6PJ21 355 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 BTNL8Q6UX41 500 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 TMEM17Q86X19 198 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 DMBX1Q8NFW5 382 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 OR1L8Q8NGR8 309 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 TMEM190Q8WZ59 177 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 BSCL2Q96G97 398 aaPredicted RBP11.84□□□□□ -0.51
ERCC1-201ENST00000013807 SPAG8Q99932 426 aaPredicted RBP11.84□□□□□ -0.51
ERCC1-201ENST00000013807 GGTLC1Q9BX51 225 aa11.84□□□□□ -0.51
ERCC1-201ENST00000013807 FAM212BQ9NTI7 297 aaPredicted RBP11.84□□□□□ -0.51
ERCC1-201ENST00000013807 HYDINQ4G0P3 5121 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 TSPAN4O14817 238 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 SCAF4O95104 1147 aaKnown RBP11.83□□□□□ -0.52
ERCC1-201ENST00000013807 OR13C7P0DN81 318 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 HERV-K104P61576 105 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 NEDD8Q15843 81 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 UBE2NLQ5JXB2 153 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 RBPMS2Q6ZRY4 209 aaKnown RBP11.83□□□□□ -0.52
ERCC1-201ENST00000013807 OR2C3Q8N628 320 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 FCAMRQ8WWV6 532 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 DGCR14Q96DF8 476 aaKnown RBP11.83□□□□□ -0.52
ERCC1-201ENST00000013807 IFT46Q9NQC8 304 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 EHFQ9NZC4 300 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 TP53TG1Q9Y2A0 90 aa11.83□□□□□ -0.52
ERCC1-201ENST00000013807 F11RQ9Y624 299 aaKnown RBP11.83□□□□□ -0.52
ERCC1-201ENST00000013807 MEIS3P1A6NDR6 274 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 F8W735 103 aaPredicted RBP11.82□□□□□ -0.52
ERCC1-201ENST00000013807 K7EMT4 169 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 NDUFA4O00483 81 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 RPS19P39019 145 aaKnown RBP11.82□□□□□ -0.52
ERCC1-201ENST00000013807 MFAP2P55001 183 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 TAS2R46P59540 309 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 ERVK-16P61578 105 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 Q6ZWC4 215 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 LYSMD2Q8IV50 215 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 CMTM1Q8IZ96 169 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 OR1L6Q8NGR2 347 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 OR5B3Q8NH48 314 aa11.82□□□□□ -0.52
ERCC1-201ENST00000013807 LSM10Q969L4 123 aaKnown RBP11.82□□□□□ -0.52
ERCC1-201ENST00000013807 ZNF2Q9BSG1 426 aaPredicted RBP11.82□□□□□ -0.52
ERCC1-201ENST00000013807 DAZ1Q9NQZ3 744 aaKnown RBP11.82□□□□□ -0.52
ERCC1-201ENST00000013807 RLN1P04808 185 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 FCER2P06734 321 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 ATF4P18848 351 aaPredicted RBP11.81□□□□□ -0.52
ERCC1-201ENST00000013807 LPAR6P43657 344 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 TAS2R20P59543 309 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 TMEM69Q5SWH9 247 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 SLC25A24Q6NUK1 477 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 SLC38A6Q8IZM9 456 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 SCARB1Q8WTV0 552 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 YIPF6Q96EC8 236 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 TMEM14BQ9NUH8 114 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 FKBP11Q9NYL4 201 aa11.81□□□□□ -0.52
ERCC1-201ENST00000013807 OR2T8A6NH00 312 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 K7EIM0 57 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 GPR31O00270 319 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 KRASP01116 189 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 FCGR2BP31994 310 aaPredicted RBP11.8□□□□□ -0.52
ERCC1-201ENST00000013807 PRSS3P35030 304 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 ADMP35318 185 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 TGFBR1P36897 503 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 OR6F1Q8NGZ6 308 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 ZNF414Q96IQ9 312 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 CMTM3Q96MX0 182 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 C21orf62Q9NYP8 219 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 PRNDQ9UKY0 176 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 SELENOKQ9Y6D0 94 aa11.8□□□□□ -0.52
ERCC1-201ENST00000013807 IGHV3-35A0A0C4DH35 117 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 KIR2DL5BA0A0G2JN68 375 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 KIR2DL5BA0A0G2JPC4 375 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 C15orf62A8K5M9 175 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 UBE2CO00762 179 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 SNAPC5O75971 98 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 PMP2P02689 132 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 CTSGP08311 255 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 TNFRSF9Q07011 255 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 LAMTOR1Q6IAA8 161 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 LPCAT3Q6P1A2 487 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 KIR2DL5AQ8N109 375 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 SAMD12Q8N8I0 201 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 OR5H2Q8NGV7 314 aa11.79□□□□□ -0.52
ERCC1-201ENST00000013807 OR1P1Q8NH06 330 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms