RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 C9orf106Q8NAJ2 232 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 NHLRC2Q8NBF2 726 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 BTF3L4Q96K17 158 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 IER2Q9BTL4 223 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 TMEM208Q9BTX3 173 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 TNFSF13O75888 250 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 CA1P00915 261 aaPredicted RBP11.53□□□□□ -0.56
USH1C-201ENST00000005226 IGKV3-15P01624 115 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 LINC00869P0C866 280 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 COMPP49747 757 aaPredicted RBP11.53□□□□□ -0.56
USH1C-201ENST00000005226 AARDQ4LEZ3 155 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 CT45A1Q5HYN5 189 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 VHLLQ6RSH7 139 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 SLC24A4Q8NFF2 622 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 CT45A3Q8NHU0 189 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 RCHY1Q96PM5 261 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 UHRF2Q96PU4 802 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 GCM1Q9NP62 436 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 NAT8BQ9UHF3 227 aa11.53□□□□□ -0.56
USH1C-201ENST00000005226 HELTA6NFD8 242 aa11.52□□□□□ -0.56
USH1C-201ENST00000005226 PCNX2A6NKB5 2137 aa11.52□□□□□ -0.56
USH1C-201ENST00000005226 TNFSF10P50591 281 aa11.52□□□□□ -0.56
USH1C-201ENST00000005226 TMPRSS3P57727 454 aa11.52□□□□□ -0.56
USH1C-201ENST00000005226 MRPL54Q6P161 138 aaKnown RBP11.52□□□□□ -0.56
USH1C-201ENST00000005226 TEX43Q6ZNM6 134 aa11.52□□□□□ -0.56
USH1C-201ENST00000005226 TMEM68Q96MH6 324 aa11.52□□□□□ -0.56
USH1C-201ENST00000005226 OPN3Q9H1Y3 402 aaPredicted RBP11.52□□□□□ -0.56
USH1C-201ENST00000005226 ZNF891A8MT65 544 aaPredicted RBP11.52□□□□□ -0.57
USH1C-201ENST00000005226 A8MXE2 369 aa11.52□□□□□ -0.57
USH1C-201ENST00000005226 GNG4P50150 75 aa11.52□□□□□ -0.57
USH1C-201ENST00000005226 GNG10P50151 68 aa11.52□□□□□ -0.57
USH1C-201ENST00000005226 PAFAH1B2P68402 229 aa11.52□□□□□ -0.57
USH1C-201ENST00000005226 MOGAT3Q86VF5 341 aa11.52□□□□□ -0.57
USH1C-201ENST00000005226 GCSAMQ8N6F7 178 aa11.52□□□□□ -0.57
USH1C-201ENST00000005226 MIEN1Q9BRT3 115 aa11.52□□□□□ -0.57
USH1C-201ENST00000005226 VAMP8Q9BV40 100 aa11.52□□□□□ -0.57
USH1C-201ENST00000005226 CLCF1Q9UBD9 225 aa11.52□□□□□ -0.57
USH1C-201ENST00000005226 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.57
USH1C-201ENST00000005226 MAP1BP46821 2468 aaKnown RBP11.52□□□□□ -0.57
USH1C-201ENST00000005226 IGKV1OR2-108A0A075B7D4 117 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 IGHV1-18A0A0C4DH31 117 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 PMCHP20382 165 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 LYG1Q8N1E2 194 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 DEFB108BQ8NET1 73 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 OR52E5Q8NH55 327 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 ZNF503Q96F45 646 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 FER1L6-AS2Q96M78 137 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 SERTAD4Q9NUC0 356 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 CALYQ9NYX4 217 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 YLPM1P49750 1951 aaKnown RBP11.51□□□□□ -0.57
USH1C-201ENST00000005226 SAA2-SAA4A0A096LPE2 208 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 TRGV10A0A0A0MS01 117 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 IGHV2OR16-5A0A0B4J2B6 119 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 C15orf61A6NNL5 157 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 SAA2P0DJI9 122 aaPredicted RBP11.51□□□□□ -0.57
USH1C-201ENST00000005226 MGST1P10620 155 aaKnown RBP11.51□□□□□ -0.57
USH1C-201ENST00000005226 FAM19A2Q8N3H0 131 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 DDB2Q92466 427 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 LINC00479Q96M42 142 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 JPT1Q9UK76 154 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 SPRY3O43610 288 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 OR7C2O60412 319 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 RPLP1P05386 114 aaKnown RBP11.51□□□□□ -0.57
USH1C-201ENST00000005226 CCL11P51671 97 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 SUMO1P63165 101 aaKnown RBP11.51□□□□□ -0.57
USH1C-201ENST00000005226 SIGLECL1Q8N7X8 197 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 NABP2Q9BQ15 211 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 TXNDC17Q9BRA2 123 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 ENY2Q9NPA8 101 aa11.51□□□□□ -0.57
USH1C-201ENST00000005226 ROS1P08922 2347 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 TRAV5A0A0B4J249 113 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 GPX1P07203 203 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 HSPE1P61604 102 aaKnown RBP11.5□□□□□ -0.57
USH1C-201ENST00000005226 RANP62826 216 aaKnown RBP11.5□□□□□ -0.57
USH1C-201ENST00000005226 PRR20EP86478 221 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 PRR20CP86479 221 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 PRR20DP86480 221 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 PRR20BP86481 221 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 PRR20AP86496 221 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 SNRNP40Q96DI7 357 aaKnown RBP11.5□□□□□ -0.57
USH1C-201ENST00000005226 C20orf144Q9BQM9 153 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 IDI2-AS1Q9NZ38 188 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 TBL2Q9Y4P3 447 aaKnown RBP11.5□□□□□ -0.57
USH1C-201ENST00000005226 DSCAMO60469 2012 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 MGST3O14880 152 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 MMP23AO75900 390 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 Q8N976 141 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 OR9G1Q8NH87 305 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 FAM168AQ92567 244 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 C11orf52Q96A22 123 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 SSBP3Q9BWW4 388 aaPredicted RBP11.5□□□□□ -0.57
USH1C-201ENST00000005226 OR51B2Q9Y5P1 312 aa11.5□□□□□ -0.57
USH1C-201ENST00000005226 SRRM5B3KS81 715 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 GGTLC3B5MD39 225 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 DIRC3C9JPN6 131 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 IGHV3-48P01763 117 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 BRS3P32247 399 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 AMTP48728 403 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 ZNF83P51522 516 aa11.49□□□□□ -0.57
USH1C-201ENST00000005226 TMEM183BQ1AE95 376 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms