RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 IGHV1-18A0A0C4DH31 117 aa11.42□□□□□ -0.58
PHGDH-233ENST00000642021 NKX2-8O15522 239 aa11.42□□□□□ -0.58
PHGDH-233ENST00000642021 IGHG3P01860 377 aa11.42□□□□□ -0.58
PHGDH-233ENST00000642021 GCH1P30793 250 aa11.42□□□□□ -0.58
PHGDH-233ENST00000642021 IFI27L2Q9H2X8 130 aa11.42□□□□□ -0.58
PHGDH-233ENST00000642021 SEPSECSQ9HD40 501 aaKnown RBP11.42□□□□□ -0.58
PHGDH-233ENST00000642021 ELOVL5Q9NYP7 299 aa11.42□□□□□ -0.58
PHGDH-233ENST00000642021 YTHDF2Q9Y5A9 579 aaKnown RBP11.42□□□□□ -0.58
PHGDH-233ENST00000642021 TET2Q6N021 2002 aaPredicted RBP11.42□□□□□ -0.58
PHGDH-233ENST00000642021 PCNX2A6NKB5 2137 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 CD99P14209 185 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 THBS3P49746 956 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 CCL11P51671 97 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 FOXL1Q12952 345 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 TMEM140Q9NV12 185 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 BDP1A6H8Y1 2624 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 HEATR1Q9H583 2144 aaKnown RBP11.41□□□□□ -0.58
PHGDH-233ENST00000642021 FOXH1O75593 365 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 NPSP0C0P6 89 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 SP9P0CG40 484 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 TMPRSS3P57727 454 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 GCSAMQ8N6F7 178 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 FDCSPQ8NFU4 85 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 SVILO95425 2214 aa11.41□□□□□ -0.58
PHGDH-233ENST00000642021 MPDU1O75352 247 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 IGLV1-44P01699 117 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 MYOD1P15172 320 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 PAX5Q02548 391 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-233ENST00000642021 PLA2G2CQ5R387 149 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 FAM201AQ5SY85 155 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 JPT1Q9UK76 154 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 TCF19Q9Y242 345 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 LSM4Q9Y4Z0 139 aaKnown RBP11.4□□□□□ -0.58
PHGDH-233ENST00000642021 SRRM5B3KS81 715 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 F6UZH7 168 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 YPEL1O60688 119 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 MBNL2Q5VZF2 373 aaKnown RBP11.4□□□□□ -0.58
PHGDH-233ENST00000642021 OR52E5Q8NH55 327 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 NOL4LQ96MY1 436 aaPredicted RBP11.4□□□□□ -0.58
PHGDH-233ENST00000642021 YPEL2Q96QA6 119 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 S1PR3Q99500 378 aa11.4□□□□□ -0.58
PHGDH-233ENST00000642021 INTS1Q8N201 2190 aaKnown RBP11.4□□□□□ -0.59
PHGDH-233ENST00000642021 CD33P20138 364 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 HLA-DRB5Q30154 266 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 NDUFAF3Q9BU61 184 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 ICE1Q9Y2F5 2266 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 GRIFINA4D1Z8 144 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 FAM90A9PA6NNJ1 464 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 CXorf1O96002 111 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 CRYABP02511 175 aaKnown RBP11.39□□□□□ -0.59
PHGDH-233ENST00000642021 IL6RP08887 468 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-233ENST00000642021 FRMD6-AS1P0C7T7 363 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 ADMP35318 185 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 TIMP3P35625 211 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 TEX38Q6PEX7 206 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 DDB2Q92466 427 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 K7EN84 100 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 SLC17A3O00476 420 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 DLEU1O43261 78 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 ERVK-16P61578 105 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 EFNB3Q15768 340 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 CR1LQ2VPA4 569 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 TRAT1Q6PIZ9 186 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 IMMP2LQ96T52 175 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 NPVFQ9HCQ7 196 aa11.39□□□□□ -0.59
PHGDH-233ENST00000642021 MDFIC2A0A1B0GVS7 189 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 AHRRA9YTQ3 701 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 MGST3O14880 152 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 RPL31P62899 125 aaKnown RBP11.38□□□□□ -0.59
PHGDH-233ENST00000642021 MRPS11P82912 194 aaKnown RBP11.38□□□□□ -0.59
PHGDH-233ENST00000642021 CT45A1Q5HYN5 189 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 DUX4L9Q6RFH8 374 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-233ENST00000642021 C1orf162Q8NEQ5 155 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-233ENST00000642021 CT45A3Q8NHU0 189 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 F2RL2O00254 374 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 TNFSF13O75888 250 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 LINC00614P0C842 121 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 GCHFRP30047 84 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 CCKARP32238 428 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 STPG3Q8N7X2 389 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 C22orf15Q8WYQ4 148 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 TMEM208Q9BTX3 173 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 ZNF71Q9NQZ8 489 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-233ENST00000642021 PLSCR4Q9NRQ2 329 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 TP53TG3Q9ULZ0 132 aa11.38□□□□□ -0.59
PHGDH-233ENST00000642021 SCGB1D1O95968 90 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 CBLN1P23435 193 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 C17orf58Q2M2W7 97 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 MOGAT3Q86VF5 341 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 OR10G8Q8NGN5 311 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 FKBP11Q9NYL4 201 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 CALYQ9NYX4 217 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 DKK4Q9UBT3 224 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 CACNA1GO43497 2377 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 EREGO14944 169 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 CGB3P0DN86 165 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 CGB7P0DN87 165 aa11.37□□□□□ -0.59
PHGDH-233ENST00000642021 YPEL3P61236 119 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-233ENST00000642021 IQCJQ1A5X6 159 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms