RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 MARCH11A6NNE9 402 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 H3BUA1 57 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 KRASP01116 189 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 TRGV3P03979 118 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 CTSDP07339 412 aaPredicted RBP20.66■□□□□ 0.9
VEGFA-231ENST00000640499 IGLL1P15814 213 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 CD33P20138 364 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 RPL27AP46776 148 aaKnown RBP20.66■□□□□ 0.9
VEGFA-231ENST00000640499 TPPP2P59282 170 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 OR2B8PP59922 312 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 DEFA5Q01523 94 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 C19orf35Q6ZS72 473 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 TTC9CQ8N5M4 171 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 DMBX1Q8NFW5 382 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 SDHCQ99643 169 aaPredicted RBP20.66■□□□□ 0.9
VEGFA-231ENST00000640499 C5orf66Q9H5L9 145 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 SLA2Q9H6Q3 261 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 GPR132Q9UNW8 380 aa20.66■□□□□ 0.9
VEGFA-231ENST00000640499 PRH1P02810 166 aa20.65■□□□□ 0.9
VEGFA-231ENST00000640499 OR9G9P0C7N8 305 aa20.65■□□□□ 0.9
VEGFA-231ENST00000640499 S100GP29377 79 aa20.65■□□□□ 0.9
VEGFA-231ENST00000640499 ZNF45Q02386 682 aa20.65■□□□□ 0.9
VEGFA-231ENST00000640499 CADM3Q8N126 398 aa20.65■□□□□ 0.9
VEGFA-231ENST00000640499 OR11H1Q8NG94 326 aa20.65■□□□□ 0.9
VEGFA-231ENST00000640499 ZFAND1Q8TCF1 268 aa20.65■□□□□ 0.9
VEGFA-231ENST00000640499 SPIN2AQ99865 258 aa20.65■□□□□ 0.9
VEGFA-231ENST00000640499 SPIN2BQ9BPZ2 258 aa20.65■□□□□ 0.9
VEGFA-231ENST00000640499 ZNF355PQ9NSJ1 428 aa20.65■□□□□ 0.9
VEGFA-231ENST00000640499 IGHV3-11P01762 117 aa20.64■□□□□ 0.89
VEGFA-231ENST00000640499 AREGP15514 252 aa20.64■□□□□ 0.89
VEGFA-231ENST00000640499 BEAN1Q3B7T3 259 aa20.64■□□□□ 0.89
VEGFA-231ENST00000640499 OR1N2Q8NGR9 330 aa20.64■□□□□ 0.89
VEGFA-231ENST00000640499 SEC22AQ96IW7 307 aa20.64■□□□□ 0.89
VEGFA-231ENST00000640499 FYTTD1Q96QD9 318 aaKnown RBP20.64■□□□□ 0.89
VEGFA-231ENST00000640499 LGALS1P09382 135 aaKnown RBP20.63■□□□□ 0.89
VEGFA-231ENST00000640499 SPANXN2Q5MJ10 180 aa20.63■□□□□ 0.89
VEGFA-231ENST00000640499 KPRPQ5T749 579 aaPredicted RBP20.63■□□□□ 0.89
VEGFA-231ENST00000640499 PRRT1Q99946 306 aa20.63■□□□□ 0.89
VEGFA-231ENST00000640499 COA4Q9NYJ1 87 aa20.63■□□□□ 0.89
VEGFA-231ENST00000640499 NSG2Q9Y328 171 aa20.63■□□□□ 0.89
VEGFA-231ENST00000640499 C3orf85A0A1B0GTC6 90 aa20.62■□□□□ 0.89
VEGFA-231ENST00000640499 DBX1A6NMT0 343 aa20.62■□□□□ 0.89
VEGFA-231ENST00000640499 H0Y980 276 aa20.62■□□□□ 0.89
VEGFA-231ENST00000640499 FGF2P09038 288 aa20.62■□□□□ 0.89
VEGFA-231ENST00000640499 SURF2Q15527 256 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-231ENST00000640499 BAK1Q16611 211 aa20.62■□□□□ 0.89
VEGFA-231ENST00000640499 SP6Q3SY56 376 aa20.62■□□□□ 0.89
VEGFA-231ENST00000640499 TRBV9A0A0B4J1U6 114 aa20.61■□□□□ 0.89
VEGFA-231ENST00000640499 TEX50A0A1B0GTY4 177 aa20.61■□□□□ 0.89
VEGFA-231ENST00000640499 CD40LGP29965 261 aa20.61■□□□□ 0.89
VEGFA-231ENST00000640499 ERVK-16P61578 105 aa20.61■□□□□ 0.89
VEGFA-231ENST00000640499 COPZ2Q9P299 210 aa20.61■□□□□ 0.89
VEGFA-231ENST00000640499 IGHV4OR15-8A0A075B7B6 117 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 A0A087WW49 117 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 IGLC7A0M8Q6 106 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 IGKV1-5P01602 117 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 CRYGCP07315 174 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 ECI1P42126 302 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 DEFA6Q01524 100 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 TOMM5Q8N4H5 51 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 GDPD1Q8N9F7 314 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 TMEM230Q96A57 120 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 MCUBQ9NWR8 336 aa20.6■□□□□ 0.89
VEGFA-231ENST00000640499 NPIPB5A8MRT5 1133 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 P0C879 139 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 CTRB1P17538 263 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 PSMB6P28072 239 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 ZNF616Q08AN1 781 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 KLK9Q2XQG4 91 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 CTRB2Q6GPI1 263 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 CCDC71LQ8N9Z2 235 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 OR10W1Q8NGF6 305 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 RCC1LQ96I51 464 aaKnown RBP20.59■□□□□ 0.89
VEGFA-231ENST00000640499 FANCD2OSQ96PS1 177 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 AKIP1Q9NQ31 210 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 KLK9Q9UKQ9 250 aa20.59■□□□□ 0.89
VEGFA-231ENST00000640499 SERPINE2P07093 398 aa20.58■□□□□ 0.89
VEGFA-231ENST00000640499 UCP1P25874 307 aa20.58■□□□□ 0.89
VEGFA-231ENST00000640499 RAB25P57735 213 aa20.58■□□□□ 0.89
VEGFA-231ENST00000640499 IZUMO4Q1ZYL8 232 aa20.58■□□□□ 0.89
VEGFA-231ENST00000640499 COMMD5Q9GZQ3 224 aa20.58■□□□□ 0.89
VEGFA-231ENST00000640499 NDUFA4L2Q9NRX3 87 aa20.58■□□□□ 0.89
VEGFA-231ENST00000640499 SCP2D1Q9UJQ7 156 aa20.58■□□□□ 0.89
VEGFA-231ENST00000640499 ZNF257Q9Y2Q1 563 aa20.58■□□□□ 0.89
VEGFA-231ENST00000640499 REG1AP05451 166 aa20.57■□□□□ 0.88
VEGFA-231ENST00000640499 RHOGP84095 191 aa20.57■□□□□ 0.88
VEGFA-231ENST00000640499 CNPY1Q3B7I2 92 aa20.57■□□□□ 0.88
VEGFA-231ENST00000640499 LHFPL5Q8TAF8 219 aa20.57■□□□□ 0.88
VEGFA-231ENST00000640499 GLYATL2Q8WU03 294 aa20.57■□□□□ 0.88
VEGFA-231ENST00000640499 NAA60Q9H7X0 242 aa20.57■□□□□ 0.88
VEGFA-231ENST00000640499 C14orf166Q9Y224 244 aaKnown RBP20.57■□□□□ 0.88
VEGFA-231ENST00000640499 CRYM-AS1A6NIL9 109 aa20.56■□□□□ 0.88
VEGFA-231ENST00000640499 OR5AC1P0C628 307 aa20.56■□□□□ 0.88
VEGFA-231ENST00000640499 SLURP1P55000 103 aa20.56■□□□□ 0.88
VEGFA-231ENST00000640499 ZNF343Q6P1L6 599 aa20.56■□□□□ 0.88
VEGFA-231ENST00000640499 TMEM14BQ9NUH8 114 aa20.56■□□□□ 0.88
VEGFA-231ENST00000640499 OR51B2Q9Y5P1 312 aa20.56■□□□□ 0.88
VEGFA-231ENST00000640499 DMRT1Q9Y5R6 373 aa20.56■□□□□ 0.88
VEGFA-231ENST00000640499 A0A0G2JLM5 398 aa20.55■□□□□ 0.88
VEGFA-231ENST00000640499 C13orf42A0A1B0GVH6 325 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms