RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 MFNGO00587 321 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 SLC17A2O00624 439 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 PITX3O75364 302 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 PSMB6P28072 239 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 MIDNQ504T8 468 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 FAM159AQ6UWV7 190 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 IL17RELQ6ZVW7 336 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 FOXC2Q99958 501 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 CDCA4Q9BXL8 241 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 UQCC1Q9NVA1 299 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 LINC00312Q9Y6C7 94 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 FBLL1A6NHQ2 334 aaKnown RBP4.25□□□□□ -1.73
SCN1A-218ENST00000640036 CLDN34H7C241 214 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 ZNF735P0CB33 412 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 SIAH3Q8IW03 269 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 GBGT1Q8N5D6 347 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 ZNRF1Q8ND25 227 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 TEX37Q96LM6 180 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 QTRT1Q9BXR0 403 aaKnown RBP4.25□□□□□ -1.73
SCN1A-218ENST00000640036 CHST5Q9GZS9 411 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 Q9N2K0 584 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 FBXL7Q9UJT9 491 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 TSSC4Q9Y5U2 329 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-218ENST00000640036 IGKV1-8A0A0C4DH67 115 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 IL4P05112 153 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 PLP1P60201 277 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 LSAMPQ13449 338 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 HERPUD1Q15011 391 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 PMVKQ15126 192 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 WDR25Q64LD2 544 aaPredicted RBP4.25□□□□□ -1.73
SCN1A-218ENST00000640036 SLC35E4Q6ICL7 350 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 OR4P4Q8NGL7 312 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 OR4X1Q8NH49 305 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 HIGD1AQ9Y241 93 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 TMEM129A0AVI4 362 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 GPX1P07203 203 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 MGPP08493 103 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 CLEC2LP0C7M8 214 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 SELENOTP62341 195 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 SPANXN1Q5VSR9 72 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 ZNF66Q6ZN08 573 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 VKORC1L1Q8N0U8 176 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 POC1AQ8NBT0 407 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 KIR2DL4Q99706 377 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 NEURL2Q9BR09 285 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 RPRMQ9NS64 109 aa4.25□□□□□ -1.73
SCN1A-218ENST00000640036 TRGV4A0A0C4DH28 118 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 RPLP1P05386 114 aaKnown RBP4.24□□□□□ -1.73
SCN1A-218ENST00000640036 HCP5Q6MZN7 132 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 VMO1Q7Z5L0 202 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 ARRDC1Q8N5I2 433 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 SPAG8Q99932 426 aaPredicted RBP4.24□□□□□ -1.73
SCN1A-218ENST00000640036 PRSS27Q9BQR3 290 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 RTN4RQ9BZR6 473 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 PARLQ9H300 379 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 JPT1Q9UK76 154 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 HELZP42694 1942 aaKnown RBP4.24□□□□□ -1.73
SCN1A-218ENST00000640036 TRDV1A0A1B0GX56 115 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 PGPEP1LA6NFU8 196 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 GEMIN2O14893 280 aaKnown RBP4.24□□□□□ -1.73
SCN1A-218ENST00000640036 HYPMO75409 117 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 RPL35AP18077 110 aaKnown RBP4.24□□□□□ -1.73
SCN1A-218ENST00000640036 CRYBB2P43320 205 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 RPL29P47914 159 aaKnown RBP4.24□□□□□ -1.73
SCN1A-218ENST00000640036 CCR6P51684 374 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 TMEM177Q53S58 311 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 ARHGAP5-AS1Q96IT6 56 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 KLK11Q9UBX7 282 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 IGHV3-21A0A0B4J1V1 117 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 IGHV1-18A0A0C4DH31 117 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 UBE2L5PA0A1B0GUS4 154 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 HPRT1P00492 218 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 P01737 135 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 DUTP33316 252 aaKnown RBP4.24□□□□□ -1.73
SCN1A-218ENST00000640036 LYPD4Q6UWN0 246 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 NUDCD2Q8WVJ2 157 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 RHOVQ96L33 236 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 AUNIPQ9H7T9 357 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 TECRQ9NZ01 308 aaKnown RBP4.24□□□□□ -1.73
SCN1A-218ENST00000640036 A0A1W2PPQ1 181 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 OR2H2O95918 312 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 SLC25A4P12235 298 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 MALP21145 153 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 DAPP51397 102 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 ZNF415Q09FC8 603 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 PMS2P11Q13670 270 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 HAGHQ16775 308 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 SLC25A47Q6Q0C1 308 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 DLEU7Q6UYE1 221 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 RNF165Q6ZSG1 346 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 LGALS3P17931 250 aaKnown RBP4.24□□□□□ -1.73
SCN1A-218ENST00000640036 WNT5AP41221 380 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 PSG7Q13046 419 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 FAM120AOSQ5T036 256 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 ASCL4Q6XD76 172 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 TNFRSF14Q92956 283 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 ST6GALNAC6Q969X2 333 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 ANKRD60Q9BZ19 345 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 TMEM133Q9H2Q1 129 aa4.24□□□□□ -1.73
SCN1A-218ENST00000640036 C20orf141Q9NUB4 165 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms