RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 MUC1P15941 1255 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-246ENST00000637736 CRYBB3P26998 211 aa16.34■□□□□ 0.21
CACNA1A-246ENST00000637736 C5orf67F2Z3F1 127 aa16.34■□□□□ 0.21
CACNA1A-246ENST00000637736 COL6A6A6NMZ7 2263 aa16.34■□□□□ 0.21
CACNA1A-246ENST00000637736 EDA2RQ9HAV5 297 aa16.34■□□□□ 0.21
CACNA1A-246ENST00000637736 MRPS18BQ9Y676 258 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-246ENST00000637736 SBF2Q86WG5 1849 aa16.34■□□□□ 0.21
CACNA1A-246ENST00000637736 TRAV8-2A0A0B4J237 113 aa16.33■□□□□ 0.21
CACNA1A-246ENST00000637736 CA1P00915 261 aaPredicted RBP16.33■□□□□ 0.21
CACNA1A-246ENST00000637736 NPIPB4C9JG80 1138 aa16.33■□□□□ 0.21
CACNA1A-246ENST00000637736 EIF3GO75821 320 aaKnown RBP eCLIP16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 PAX2Q02962 417 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 SDF2L1Q9HCN8 221 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 C8orf88P0DMB2 117 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 LINC00305Q7Z4B0 112 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 SPSB4Q96A44 273 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A10PA6NDY2 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A18PA6NE21 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A16PA6NEW6 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A20PA6NIJ5 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A8PA6NJQ4 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A7PA6NKC0 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A22PA8MWA6 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A12PA8MX19 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A5PA8MXJ8 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A23PA8MXZ1 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A15PP0C7V4 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A13PP0C7W8 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A14PP0C7W9 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 FAM90A24PP0C7X0 464 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 SCN10AQ9Y5Y9 1956 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 LNP1A1A4G5 178 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 AGAP20933 346 aa16.33■□□□□ 0.2
CACNA1A-246ENST00000637736 NGFRP08138 427 aa16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 PSG4Q00888 419 aa16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 ACSF3Q4G176 576 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 GTSCR1Q86UQ5 136 aa16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 PEF1Q9UBV8 284 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 TUBD1Q9UJT1 453 aa16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 HSPB1P04792 205 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 ODAMA1E959 279 aa16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 MS4A3Q96HJ5 214 aa16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 ZNF146Q15072 292 aa16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 ZNF826PQ6ZT77 177 aa16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 MARCH11A6NNE9 402 aa16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 ZNHIT1O43257 154 aa16.32■□□□□ 0.2
CACNA1A-246ENST00000637736 UPK3AO75631 287 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 OR4X2Q8NGF9 303 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 SLC25A15Q9Y619 301 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 ATP5LO75964 103 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 SAXO1Q8IYX7 474 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 ZNF385AQ96PM9 386 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 KCNK7Q9Y2U2 307 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 FSTP19883 344 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 VCX2Q9H322 139 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 DTX2Q86UW9 622 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 TMEM186Q96B77 213 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 KCNS1Q96KK3 526 aa16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 FOXD3Q9UJU5 478 aaPredicted RBP16.31■□□□□ 0.2
CACNA1A-246ENST00000637736 CXorf65A6NEN9 183 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 PEX7O00628 323 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 KLK2P20151 261 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 ATP5IP56385 69 aaPredicted RBP16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 TAF15Q92804 592 aaKnown RBP eCLIP16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 UNC119Q13432 240 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 PNKDQ8N490 385 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 A0A0G2JLM5 398 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 SNAI3Q3KNW1 292 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 CST9LQ9H4G1 147 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 PATE3B3GLJ2 98 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 PKIBQ9C010 78 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 S100A7L2Q5SY68 101 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 PLSCR2Q9NRY7 297 aa16.3■□□□□ 0.2
CACNA1A-246ENST00000637736 TMEM50AO95807 157 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 ZNF415Q09FC8 603 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 ICAM4Q14773 271 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 ALX4Q9H161 411 aaPredicted RBP16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 ELOVL5Q9NYP7 299 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 TNFRSF9Q07011 255 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 FGFRL1Q8N441 504 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 IGHV1-69-2A0A0G2JMI3 117 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 B9A039 149 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 TRAV24A0A0B4J272 114 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 OR9G4Q8NGQ1 327 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 SLC25A2Q9BXI2 301 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 OR4D11Q8NGI4 311 aa16.29■□□□□ 0.2
CACNA1A-246ENST00000637736 TGIF2-C20orf24A0A0A6YYL0 155 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 A0A1B0GV90 55 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 SRSF6Q13247 344 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 PSCAO43653 123 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 OR9G1Q8NH87 305 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 SPCS1Q9Y6A9 102 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 GRIFINA4D1Z8 144 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 PTP4A3O75365 173 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 GLI3P10071 1580 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 MRPL20Q9BYC9 149 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 PEMTQ9UBM1 199 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 CD8AP01732 235 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 C1QAP02745 245 aa16.28■□□□□ 0.2
CACNA1A-246ENST00000637736 A0A1W2PPV9 198 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms