RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 RNASE11Q8TAA1 199 aaKnown RBP12.59□□□□□ -0.39
CLN6-216ENST00000636876 CHPT1Q8WUD6 406 aa12.59□□□□□ -0.39
CLN6-216ENST00000636876 A0A0B4J2A0 478 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 PIGBOS1A0A0B4J2F0 54 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 A0A0G2JRQ6 117 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 HAX1O00165 279 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 MYOD1P15172 320 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 SPNP16150 400 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 RPL27AP46776 148 aaKnown RBP12.58□□□□□ -0.4
CLN6-216ENST00000636876 IZUMO4Q1ZYL8 232 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 FAM219AQ8IW50 185 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 SGMS2Q8NHU3 365 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 WIPF2Q8TF74 440 aaPredicted RBP12.58□□□□□ -0.4
CLN6-216ENST00000636876 WFDC12Q8WWY7 111 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 SRSF12Q8WXF0 261 aaKnown RBP12.58□□□□□ -0.4
CLN6-216ENST00000636876 FAM103A1Q9BTL3 118 aaKnown RBP12.58□□□□□ -0.4
CLN6-216ENST00000636876 SHPKQ9UHJ6 478 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 PRNDQ9UKY0 176 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 NSG2Q9Y328 171 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 WSB1Q9Y6I7 421 aa12.58□□□□□ -0.4
CLN6-216ENST00000636876 TRAV41A0A0B4J266 112 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 DUXBA0A1W2PPF3 345 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 PSMB11A5LHX3 300 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 C15orf61A6NNL5 157 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 DUS4LO95620 317 aaKnown RBP12.57□□□□□ -0.4
CLN6-216ENST00000636876 VDAC1P21796 283 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 OR2B8PP59922 312 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 C19orf54Q5BKX5 351 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 C12orf54Q6X4T0 127 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 LYZL2Q7Z4W2 148 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 CENPVQ7Z7K6 275 aaPredicted RBP12.57□□□□□ -0.4
CLN6-216ENST00000636876 OR52B4Q8NGK2 314 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 OR4A16Q8NH70 328 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 LSM10Q969L4 123 aaKnown RBP12.57□□□□□ -0.4
CLN6-216ENST00000636876 MARVELD1Q9BSK0 173 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 GON7Q9BXV9 100 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 COMMD5Q9GZQ3 224 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 TMEM14BQ9NUH8 114 aa12.57□□□□□ -0.4
CLN6-216ENST00000636876 A0A0B4J293 547 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 MSGN1A6NI15 193 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 INMT-MINDY4F8WBC2 141 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 G3V318 75 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 IL5P05113 134 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 SLC35B1P78383 322 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 CFHR3Q02985 330 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 TMEM267Q0VDI3 215 aaPredicted RBP12.56□□□□□ -0.4
CLN6-216ENST00000636876 ECSCRQ19T08 205 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 AKIRIN2Q53H80 203 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 NMSQ5H8A3 153 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 UNQ5815/PRO19632Q6UWF5 114 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 ZNF329Q86UD4 541 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 LFNGQ8NES3 379 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 OR1L8Q8NGR8 309 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 COQ8AQ8NI60 647 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 ZNF431Q8TF32 576 aaPredicted RBP12.56□□□□□ -0.4
CLN6-216ENST00000636876 MITD1Q8WV92 249 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 GPR146Q96CH1 333 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 SPIN2AQ99865 258 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 SPIN2BQ9BPZ2 258 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 SEC22CQ9BRL7 303 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 FKBP11Q9NYL4 201 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 FOXA2Q9Y261 457 aaPredicted RBP12.56□□□□□ -0.4
CLN6-216ENST00000636876 OR51B2Q9Y5P1 312 aa12.56□□□□□ -0.4
CLN6-216ENST00000636876 TEX50A0A1B0GTY4 177 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 A0A1B0GW64 132 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 DBX1A6NMT0 343 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 TEX22C9J3V5 150 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 E7EUB6 86 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 OPN1MWP04001 364 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 OPN1MW2P0DN77 364 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 OPN1MW3P0DN78 364 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 KRTAP10-3P60369 221 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 C10orf99Q6UWK7 81 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 Q6ZRM9 215 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 MINDY2Q8NBR6 621 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 OR5AU1Q8NGC0 362 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 FYTTD1Q96QD9 318 aaKnown RBP12.55□□□□□ -0.4
CLN6-216ENST00000636876 PHB2Q99623 299 aa12.55□□□□□ -0.4
CLN6-216ENST00000636876 TET2Q6N021 2002 aaPredicted RBP12.55□□□□□ -0.4
CLN6-216ENST00000636876 CGB1A6NKQ9 187 aa12.54□□□□□ -0.4
CLN6-216ENST00000636876 PRAF2O60831 178 aa12.54□□□□□ -0.4
CLN6-216ENST00000636876 RBMXL2O75526 392 aaKnown RBP12.54□□□□□ -0.4
CLN6-216ENST00000636876 IGHG4P01861 327 aa12.54□□□□□ -0.4
CLN6-216ENST00000636876 PPIFP30405 207 aaKnown RBP12.54□□□□□ -0.4
CLN6-216ENST00000636876 RGS21Q2M5E4 152 aa12.54□□□□□ -0.4
CLN6-216ENST00000636876 ASPHD1Q5U4P2 390 aa12.54□□□□□ -0.4
CLN6-216ENST00000636876 OR5B3Q8NH48 314 aa12.54□□□□□ -0.4
CLN6-216ENST00000636876 TMEM68Q96MH6 324 aa12.54□□□□□ -0.4
CLN6-216ENST00000636876 ZNF747Q9BV97 191 aa12.54□□□□□ -0.4
CLN6-216ENST00000636876 QTRT1Q9BXR0 403 aaKnown RBP12.54□□□□□ -0.4
CLN6-216ENST00000636876 CACNG5Q9UF02 275 aa12.54□□□□□ -0.4
CLN6-216ENST00000636876 ZNF257Q9Y2Q1 563 aa12.54□□□□□ -0.4
CLN6-216ENST00000636876 HMX3A6NHT5 357 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 DHFRP00374 187 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 HOXB5P09067 269 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 TRAPPC2P0DI81 140 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 TRAPPC2BP0DI82 140 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 APELAP0DMC3 54 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 SULT1A3P0DMM9 295 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms