RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 MMP23AO75900 390 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 TCL1AP56279 114 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 KCNIP4Q6PIL6 250 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 LHFPL4Q7Z7J7 247 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 CENPVQ7Z7K6 275 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 GGTLC1Q9BX51 225 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 GCM1Q9NP62 436 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 MDFIC2A0A1B0GVS7 189 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 M0R296 226 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 CGAP01215 116 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 IGFBP2P18065 325 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 KITLGP21583 273 aa11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 CNN1P51911 297 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 RPL31P62899 125 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 ARSJQ5FYB0 599 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-228ENST00000636610 HPRT1P00492 218 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 WNT2P09544 360 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 REG1BP48304 166 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 RELBQ01201 579 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 C22orf34Q6ZV56 151 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 NHLRC2Q8NBF2 726 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 SFRP2Q96HF1 295 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 LURAP1Q96LR2 239 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 IFI27L2Q9H2X8 130 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 CBLN4Q9NTU7 201 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 SH3BGRL2Q9UJC5 107 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 LRBAP50851 2863 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 ZNF705FA8MVS1 300 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 ZNF883P0CG24 379 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 ZNF705DP0CH99 300 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 ZNF705BP0CI00 300 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 ZNF90Q03938 601 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 PRB3Q04118 309 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 ACTL10Q5JWF8 245 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 CCL13Q99616 98 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 PYGO2Q9BRQ0 406 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 SAA2-SAA4A0A096LPE2 208 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 CA2P00918 260 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 SAA2P0DJI9 122 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 PRB4P10163 310 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 FXYD3Q14802 87 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 SSX2Q16385 188 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 KIAA1644Q3SXP7 199 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 CT45A1Q5HYN5 189 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 FAM216BQ8N7L0 139 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 STPG3Q8N7X2 389 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 CT45A3Q8NHU0 189 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 PARD6GQ9BYG4 376 aaPredicted RBP11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 MRPL37Q9BZE1 423 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 CALYQ9NYX4 217 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 PROCRQ9UNN8 238 aa11.57□□□□□ -0.56
CACNA1A-228ENST00000636610 F2Z2F3 143 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 IGKV1-16P04430 117 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 IL6RP08887 468 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 ADMP35318 185 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 TIMP3P35625 211 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 SPCS3P61009 180 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 MIR17HGQ75NE6 70 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 BHLHA15Q7RTS1 189 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 REC114Q7Z4M0 266 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 STARD4Q96DR4 205 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 C1orf159Q96HA4 380 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 ADH4P08319 380 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 LOXL3P58215 753 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 PAX5Q02548 391 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 OR4A47Q6IF82 309 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 DOLPP1Q86YN1 238 aa11.56□□□□□ -0.56
CACNA1A-228ENST00000636610 GGCTO75223 188 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 TNFSF13O75888 250 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 TDRG1Q3Y452 100 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 TEX38Q6PEX7 206 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 OR10W1Q8NGF6 305 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 TMEM18Q96B42 140 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 FAM103A1Q9BTL3 118 aaKnown RBP11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 CACNA1BQ00975 2339 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 EREGO14944 169 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 TGOLN2O43493 480 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 APELAP0DMC3 54 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 VDAC2P45880 294 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 IER3P46695 156 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 RAB4BP61018 213 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 CCL8P80075 99 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 EFNB3Q15768 340 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 ACSF3Q4G176 576 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 ENY2Q9NPA8 101 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 DKK4Q9UBT3 224 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 TP53TG5Q9Y2B4 290 aa11.55□□□□□ -0.56
CACNA1A-228ENST00000636610 K7EN84 100 aa11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 NPY1RP25929 384 aa11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 PSG5Q15238 335 aa11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 ZNF71Q9NQZ8 489 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 SRRM5B3KS81 715 aa11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 MGST3O14880 152 aa11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 PDE6DO43924 150 aa11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 OR7C2O60412 319 aa11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 MRPS11P82912 194 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 VWC2Q2TAL6 325 aa11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 TGIF2LXQ8IUE1 241 aa11.54□□□□□ -0.56
CACNA1A-228ENST00000636610 TLN1Q9Y490 2541 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms