RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 OR13A1Q8NGR1 328 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 OBP2BQ9NPH6 170 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 ASCL3Q9NQ33 180 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 IL19Q9UHD0 177 aa12.27□□□□□ -0.45
CACNA1A-220ENST00000635988 KMT2EQ8IZD2 1858 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 PI4KAP42356 2102 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 GTF3C1Q12789 2109 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 IGHV3-43A0A0B4J1X8 118 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 IGHV3-64DA0A0J9YX35 117 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 IGHV3-43DP0DP04 118 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 KIR2DS2P43631 304 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 HNRNPA3P51991 378 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 PRRX1P54821 245 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 MMDQ15546 238 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 TIGITQ495A1 244 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 TMEM136Q6ZRR5 245 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 TMEM251Q8N6I4 163 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 OR4P4Q8NGL7 312 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 DIDO1Q9BTC0 2240 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 A0A1W2PS18 150 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 WNT9BO14905 357 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 ZNF324O75467 553 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 SP1P08047 785 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 TDGF1P13385 188 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 TFPI2P48307 235 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 RELBQ01201 579 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 ALKBH6Q3KRA9 238 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 CENPWQ5EE01 88 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 PMS2CLQ68D20 193 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 TMPRSS7Q7RTY8 843 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 TIPARPQ7Z3E1 657 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 ABHD12Q8N2K0 398 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 ORAOV1Q8WV07 137 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 CXXC4Q9H2H0 198 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 TCF19Q9Y242 345 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 LAMTOR2Q9Y2Q5 125 aa12.26□□□□□ -0.45
CACNA1A-220ENST00000635988 DEFB108AA8MXU0 73 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 FNDC10F2Z333 226 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 ISLRO14498 428 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 AMY1AP04745 511 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 CFIP05156 583 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 GNG10P50151 68 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 Q6ZN92 141 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 RFESDQ8TAC1 157 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 TMEM238LA0A1B0GVL6 79 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 C20orf202A1L168 122 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 DPRXA6NFQ7 191 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 C15orf65H3BRN8 121 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 TCF21O43680 179 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 HYPMO75409 117 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 SMIM21Q3B7S5 101 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 SPATA31B1PQ5VZV4 182 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 Q6ZR03 302 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 C11orf53Q8IXP5 236 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 CDX2Q99626 313 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 JPT1Q9UK76 154 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 RNF114Q9Y508 228 aa12.25□□□□□ -0.45
CACNA1A-220ENST00000635988 FRMD6-AS1P0C7T7 363 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 PMCHP20382 165 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 PRR20EP86478 221 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 PRR20CP86479 221 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 PRR20DP86480 221 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 PRR20BP86481 221 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 PRR20AP86496 221 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 C1orf159Q96HA4 380 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 S1PR3Q99500 378 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 TRIOO75962 3097 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 M0R1X1 148 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 CGAP01215 116 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 CELA3BP08861 270 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 NPY1RP25929 384 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 ZNF83P51522 516 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 PMCHL1Q16048 86 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 RTL8BQ17RB0 113 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 SAPCD1Q5SSQ6 148 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 PQLC2Q6ZP29 291 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 ZNF826PQ6ZT77 177 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 SLC24A4Q8NFF2 622 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 BORCS7Q96B45 105 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 HES7Q9BYE0 225 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 TMEM140Q9NV12 185 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 FOXJ2Q9P0K8 574 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 GNG12Q9UBI6 72 aa12.24□□□□□ -0.45
CACNA1A-220ENST00000635988 YLPM1P49750 1951 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-220ENST00000635988 PROP1O75360 226 aa12.23□□□□□ -0.45
CACNA1A-220ENST00000635988 FOXH1O75593 365 aa12.23□□□□□ -0.45
CACNA1A-220ENST00000635988 ENY2Q9NPA8 101 aa12.23□□□□□ -0.45
CACNA1A-220ENST00000635988 MRPL27Q9P0M9 148 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-220ENST00000635988 MRPS16Q9Y3D3 137 aaKnown RBP12.23□□□□□ -0.45
CACNA1A-220ENST00000635988 MYO15AQ9UKN7 3530 aa12.23□□□□□ -0.45
CACNA1A-220ENST00000635988 C3orf79P0CE67 100 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 CRYBB3P26998 211 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 SRIP30626 198 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 PSG5Q15238 335 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 C3AR1Q16581 482 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 WDR82Q6UXN9 313 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 VASH2Q86V25 355 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 CXorf67Q86X51 503 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 TPRX1Q8N7U7 411 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 STPG4Q8N801 248 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms