RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 SEC11CQ9BY50 192 aa6.21□□□□□ -1.42
PKP4-217ENST00000628904 MOSP00540 346 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 HBE1P02100 147 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 GAPDHP04406 335 aaKnown RBP6.2□□□□□ -1.42
PKP4-217ENST00000628904 FABP9Q0Z7S8 132 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 SPNS3Q6ZMD2 512 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 Q8NA96 180 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 FLYWCH2Q96CP2 140 aaKnown RBP6.2□□□□□ -1.42
PKP4-217ENST00000628904 C5orf30Q96GV9 206 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 SMIM8Q96KF7 97 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 ACTR3CQ9C0K3 210 aaPredicted RBP6.2□□□□□ -1.42
PKP4-217ENST00000628904 MS4A5Q9H3V2 200 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 INSIG2Q9Y5U4 225 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 CRYBG3Q68DQ2 2970 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 FLNCQ14315 2725 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 IGKV3-7A0A075B6H7 116 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 SH2D7A6NKC9 451 aaPredicted RBP6.2□□□□□ -1.42
PKP4-217ENST00000628904 E7EQL1 145 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 NDUFB4O95168 129 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 CA2P00918 260 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 CGAP01215 116 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 RBP4P02753 201 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 UQCRFS1P47985 274 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 NHLH1Q02575 133 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 IL15RAQ13261 267 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 PNKDQ8N490 385 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 ZNF525Q8N782 197 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 RNASE6Q93091 150 aaKnown RBP6.2□□□□□ -1.42
PKP4-217ENST00000628904 UNKLQ9H9P5 680 aaKnown RBP6.2□□□□□ -1.42
PKP4-217ENST00000628904 HIVEP2P31629 2446 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 KBTBD11-OT1A0A1B0GTJ5 212 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 C17orf112F2Z3M2 114 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 KLRD1Q13241 179 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 PSG5Q15238 335 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 HMGN3Q15651 99 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 KRTAP27-1Q3LI81 207 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 LEMD1Q68G75 181 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 RBMS3Q6XE24 437 aaKnown RBP6.2□□□□□ -1.42
PKP4-217ENST00000628904 SSX7Q7RTT5 188 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 LINC00518Q8N0U6 118 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 OR2T6Q8NHC8 308 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 NANPQ8TBE9 248 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 TMEM147Q9BVK8 224 aa6.2□□□□□ -1.42
PKP4-217ENST00000628904 ADAMTS20P59510 1910 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 C11orf94C9JXX5 98 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 FGF16O43320 207 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 HPRT1P00492 218 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 IGFBP2P18065 325 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 LCN2P80188 198 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 CDSNQ15517 529 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 UQCC3Q6UW78 93 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 RPP25LQ8N5L8 163 aaKnown RBP6.19□□□□□ -1.42
PKP4-217ENST00000628904 C1orf162Q8NEQ5 155 aaPredicted RBP6.19□□□□□ -1.42
PKP4-217ENST00000628904 ASCL2Q99929 193 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 WDR61Q9GZS3 305 aaKnown RBP6.19□□□□□ -1.42
PKP4-217ENST00000628904 H7BYZ3 331 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 HRASP01112 189 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 IGLV2-14P01704 120 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 OR10J1P30954 320 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 TIMP3P35625 211 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 ATP5G3P48201 142 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 MMDQ15546 238 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 C21orf62-AS1Q17RA5 79 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 KLF17Q5JT82 389 aaPredicted RBP6.19□□□□□ -1.42
PKP4-217ENST00000628904 SPATA31B1PQ5VZV4 182 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 HAPLN4Q86UW8 402 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 SLC24A4Q8NFF2 622 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 GINS3Q9BRX5 216 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 DERL1Q9BUN8 251 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 GAL3ST2Q9H3Q3 398 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 IL19Q9UHD0 177 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 PXMP4Q9Y6I8 212 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 DSCAMO60469 2012 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 TMEM200BQ69YZ2 307 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 ZNF383Q8NA42 475 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 OR1B1Q8NGR6 318 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 ZCCHC14Q8WYQ9 949 aaKnown RBP6.19□□□□□ -1.42
PKP4-217ENST00000628904 CIB3Q96Q77 187 aaPredicted RBP6.19□□□□□ -1.42
PKP4-217ENST00000628904 FBXL15Q9H469 300 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 IDI2-AS1Q9NZ38 188 aa6.19□□□□□ -1.42
PKP4-217ENST00000628904 FLNBO75369 2602 aaKnown RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 ZNF705GA8MUZ8 300 aaPredicted RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 IGKV1D-33P01593 117 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 IGKV1-33P01594 117 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 ARL14EPLP0DKL9 152 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 CNTFRP26992 372 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 RAB5CP51148 216 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 RPP30P78346 268 aaKnown RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 ERHP84090 104 aaKnown RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 ACOT6Q3I5F7 207 aaPredicted RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 C1orf229Q6ZS94 237 aaPredicted RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 C12orf57Q99622 126 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 NIT2Q9NQR4 276 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 LINC00527Q9UJ94 153 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 K7ENP7 123 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 TRGC2P03986 189 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 SAA1P0DJI8 122 aaPredicted RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 NBL1P41271 181 aa6.18□□□□□ -1.42
PKP4-217ENST00000628904 SUMO1P63165 101 aaKnown RBP6.18□□□□□ -1.42
PKP4-217ENST00000628904 RNF212Q495C1 297 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms