RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 PDLIM3Q53GG5 364 aaPredicted RBP10.82□□□□□ -0.68
PCDHGC3-208ENST00000622836 FAAP20Q6NZ36 180 aa10.82□□□□□ -0.68
PCDHGC3-208ENST00000622836 ADAD2Q8NCV1 583 aaKnown RBP10.82□□□□□ -0.68
PCDHGC3-208ENST00000622836 TERB2Q8NHR7 220 aa10.82□□□□□ -0.68
PCDHGC3-208ENST00000622836 ZFAND1Q8TCF1 268 aa10.82□□□□□ -0.68
PCDHGC3-208ENST00000622836 ZNF486Q96H40 463 aaPredicted RBP10.82□□□□□ -0.68
PCDHGC3-208ENST00000622836 TRAV3A0A0B4J244 114 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 ANKRD34BA5PLL1 514 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 SEC14L6B5MCN3 397 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 WIPF1O43516 503 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 GSTZ1O43708 216 aaPredicted RBP10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 SNAPC5O75971 98 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 DHFRP00374 187 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 HSPB1P04792 205 aaKnown RBP10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 IL6RP08887 468 aaPredicted RBP10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 MYOD1P15172 320 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 SLURP1P55000 103 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 RHOGP84095 191 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 POU2AF1Q16633 256 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 PYDC2Q56P42 97 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 REC114Q7Z4M0 266 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 LHFPL1Q86WI0 220 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 TTC9CQ8N5M4 171 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 CCDC71LQ8N9Z2 235 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 USMG5Q96IX5 58 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 RANGRFQ9HD47 186 aaPredicted RBP10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 COPZ2Q9P299 210 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 ZNF257Q9Y2Q1 563 aa10.81□□□□□ -0.68
PCDHGC3-208ENST00000622836 TEX22C9J3V5 150 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 OVOL1O14753 267 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 BRI3O95415 125 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 ZNF735P0CB33 412 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 DEFA4P12838 97 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 ECI1P42126 302 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 ZNF585BQ52M93 769 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 C9orf66Q5T8R8 295 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 OR4C16Q8NGL9 310 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 OR13C8Q8NGS7 320 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 MARCH1Q8TCQ1 289 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 DCUN1D4Q92564 292 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 THAP7Q9BT49 309 aaPredicted RBP10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 FAM212BQ9NTI7 297 aaPredicted RBP10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 MCUBQ9NWR8 336 aa10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 C14orf166Q9Y224 244 aaKnown RBP10.8□□□□□ -0.68
PCDHGC3-208ENST00000622836 FAM223BA6NKX1 122 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 NPIPB5A8MRT5 1133 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 E7EUB6 86 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 REG1AP05451 166 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 AREGP15514 252 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 OR2B8PP59922 312 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 RND3P61587 244 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 ATP5G2Q06055 141 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 SPANXN2Q5MJ10 180 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 H2BFWTQ7Z2G1 175 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 FAM223AQ8IWN6 122 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 DLX4Q92988 240 aaPredicted RBP10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 TSC22D3Q99576 134 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 PRRT1Q99946 306 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 HINT2Q9BX68 163 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 QTRT1Q9BXR0 403 aaKnown RBP10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 AKIP1Q9NQ31 210 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 AURKAIP1Q9NWT8 199 aaPredicted RBP10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 ZMAT5Q9UDW3 170 aaKnown RBP10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 SCP2D1Q9UJQ7 156 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 NSG2Q9Y328 171 aa10.79□□□□□ -0.68
PCDHGC3-208ENST00000622836 C3orf85A0A1B0GTC6 90 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 A0A1B0GW64 132 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 ANKRD20A5PA0PJZ0 165 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 H0Y980 276 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 RBMXL2O75526 392 aaKnown RBP10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 OR2J3O76001 311 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 CTSDP07339 412 aaPredicted RBP10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 ZP3P21754 424 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 PSMB6P28072 239 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 FAUP35544 74 aaKnown RBP10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 EXOSC2Q13868 293 aaKnown RBP10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 TRIM16LQ309B1 348 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 C19orf35Q6ZS72 473 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 Q8N402 240 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 NECAP1Q8NC96 275 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 OR51S1Q8NGJ8 323 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 OR1L8Q8NGR8 309 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 MRAPQ8TCY5 172 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 MRGPRFQ96AM1 343 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 SOSTQ9BQB4 213 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 FKBP11Q9NYL4 201 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 NDUFA13Q9P0J0 144 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 PEF1Q9UBV8 284 aaKnown RBP10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 PRNDQ9UKY0 176 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 OR51B2Q9Y5P1 312 aa10.78□□□□□ -0.68
PCDHGC3-208ENST00000622836 TEX13DA0A0J9YY54 714 aaPredicted RBP10.77□□□□□ -0.69
PCDHGC3-208ENST00000622836 SAP30O75446 220 aa10.77□□□□□ -0.69
PCDHGC3-208ENST00000622836 ATG12O94817 140 aa10.77□□□□□ -0.69
PCDHGC3-208ENST00000622836 FGF2P09038 288 aa10.77□□□□□ -0.69
PCDHGC3-208ENST00000622836 TRAPPC2P0DI81 140 aa10.77□□□□□ -0.69
PCDHGC3-208ENST00000622836 TRAPPC2BP0DI82 140 aa10.77□□□□□ -0.69
PCDHGC3-208ENST00000622836 MECP2P51608 486 aaKnown RBP10.77□□□□□ -0.69
PCDHGC3-208ENST00000622836 AKR1C2P52895 323 aa10.77□□□□□ -0.69
PCDHGC3-208ENST00000622836 AP3S2P59780 193 aa10.77□□□□□ -0.69
PCDHGC3-208ENST00000622836 ZNF45Q02386 682 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms