RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 OR13C7P0DN81 318 aa17.45■□□□□ 0.38
LIME1-210ENST00000621325 ELLP55199 621 aaPredicted RBP17.45■□□□□ 0.38
LIME1-210ENST00000621325 TLE4Q04727 773 aa17.45■□□□□ 0.38
LIME1-210ENST00000621325 ZNF726P1Q15940 193 aa17.45■□□□□ 0.38
LIME1-210ENST00000621325 KHDC3LQ587J8 217 aa17.45■□□□□ 0.38
LIME1-210ENST00000621325 SLC25A48Q6ZT89 311 aaKnown RBP17.45■□□□□ 0.38
LIME1-210ENST00000621325 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.45■□□□□ 0.38
LIME1-210ENST00000621325 OR4S2Q8NH73 311 aa17.45■□□□□ 0.38
LIME1-210ENST00000621325 H1FXQ92522 213 aaKnown RBP17.45■□□□□ 0.38
LIME1-210ENST00000621325 CIB3Q96Q77 187 aaPredicted RBP17.45■□□□□ 0.38
LIME1-210ENST00000621325 PSMG3Q9BT73 122 aaPredicted RBP17.45■□□□□ 0.38
LIME1-210ENST00000621325 MS4A5Q9H3V2 200 aa17.45■□□□□ 0.38
LIME1-210ENST00000621325 CISD1Q9NZ45 108 aaKnown RBP17.45■□□□□ 0.38
LIME1-210ENST00000621325 RBFOX3A6NFN3 312 aa17.44■□□□□ 0.38
LIME1-210ENST00000621325 C15orf62A8K5M9 175 aa17.44■□□□□ 0.38
LIME1-210ENST00000621325 NDUFAF3Q9BU61 184 aa17.44■□□□□ 0.38
LIME1-210ENST00000621325 TET2Q6N021 2002 aaPredicted RBP17.44■□□□□ 0.38
LIME1-210ENST00000621325 M0R036 132 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 SOD3P08294 240 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 KIR2DS2P43631 304 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 FBXL19-AS1Q494R0 122 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 DPPA3Q6W0C5 159 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 OR10P1Q8NGE3 313 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 KIAA1456Q9P272 454 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 A0A1B0GW64 132 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 PHOX2AO14813 284 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 THBS3P49746 956 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 PARD6GQ9BYG4 376 aaPredicted RBP17.43■□□□□ 0.38
LIME1-210ENST00000621325 SLC35B3Q9H1N7 401 aa17.43■□□□□ 0.38
LIME1-210ENST00000621325 EFNB3Q15768 340 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 C1QL4Q86Z23 238 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 TMEM147Q9BVK8 224 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 FAM90A9PA6NNJ1 464 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 PRSS47A8MTI9 375 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 LYNX1G3V0Z9 82 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 CT45A6P0DMU7 189 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 CT45A5P0DMU8 189 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 CT45A7P0DMV0 189 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 LYNX1P0DP58 116 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 RPS10P46783 165 aaKnown RBP17.42■□□□□ 0.38
LIME1-210ENST00000621325 MEF2CQ06413 473 aaPredicted RBP17.42■□□□□ 0.38
LIME1-210ENST00000621325 TFF3Q07654 80 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 LCN15Q6UWW0 184 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 RAB24Q969Q5 203 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 ZNF714Q96N38 554 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 TMEM208Q9BTX3 173 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 GAL3ST2Q9H3Q3 398 aa17.42■□□□□ 0.38
LIME1-210ENST00000621325 IGHV1-69-2A0A0G2JMI3 117 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 B9A039 149 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 DVL1O14640 695 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 NDUFB3O43676 98 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 RCC1LQ96I51 464 aaKnown RBP17.41■□□□□ 0.38
LIME1-210ENST00000621325 DLEU1O43261 78 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 IGKV1D-33P01593 117 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 IGKV1-33P01594 117 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 FGF8P55075 233 aaPredicted RBP17.41■□□□□ 0.38
LIME1-210ENST00000621325 SERF2P84101 59 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 OR4A47Q6IF82 309 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 SNHG12Q9BXW3 62 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 HIPK2Q9H2X6 1198 aa17.41■□□□□ 0.38
LIME1-210ENST00000621325 IGKV1-16P04430 117 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 FABP4P15090 132 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 MYOD1P15172 320 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 HEPN1Q6WQI6 88 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 CLDND2Q8NHS1 167 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 PINX1Q96BK5 328 aaKnown RBP17.4■□□□□ 0.38
LIME1-210ENST00000621325 SEC14L6B5MCN3 397 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 FGF7P21781 194 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 VDAC2P45880 294 aaPredicted RBP17.4■□□□□ 0.38
LIME1-210ENST00000621325 LY6DQ14210 128 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 ICAM4Q14773 271 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 ATP6V1FQ16864 119 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 LRRC10Q5BKY1 277 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 DNLZQ5SXM8 178 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 ACSM6Q6P461 480 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 HIST3H2BBQ8N257 126 aa17.4■□□□□ 0.38
LIME1-210ENST00000621325 LOXP28300 417 aaPredicted RBP17.39■□□□□ 0.37
LIME1-210ENST00000621325 GNB2P62879 340 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 TMEM30BQ3MIR4 351 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 SAPCD1Q5SSQ6 148 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 MUC15Q8N387 334 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 ADTRPQ96IZ2 230 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 HEYLQ9NQ87 328 aaPredicted RBP17.39■□□□□ 0.37
LIME1-210ENST00000621325 TCF19Q9Y242 345 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 LRBAP50851 2863 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 TRAV1-1A0A0B4J248 108 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 RRHO14718 337 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 HBE1P02100 147 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 TMEM41BQ5BJD5 291 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 ABHD12Q8N2K0 398 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 ZNF664Q8N3J9 261 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 OR52E5Q8NH55 327 aa17.39■□□□□ 0.37
LIME1-210ENST00000621325 SCAF4O95104 1147 aaKnown RBP17.38■□□□□ 0.37
LIME1-210ENST00000621325 RPP25LQ8N5L8 163 aaKnown RBP17.38■□□□□ 0.37
LIME1-210ENST00000621325 TMEM170AQ8WVE7 144 aa17.38■□□□□ 0.37
LIME1-210ENST00000621325 GNG13Q9P2W3 67 aa17.38■□□□□ 0.37
LIME1-210ENST00000621325 C15orf61A6NNL5 157 aa17.38■□□□□ 0.37
LIME1-210ENST00000621325 SRRM4A7MD48 611 aaKnown RBP17.38■□□□□ 0.37
LIME1-210ENST00000621325 CEBPGP53567 150 aa17.38■□□□□ 0.37
LIME1-210ENST00000621325 VWC2Q2TAL6 325 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms