RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 MGPP08493 103 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 LHX2P50458 406 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 RNASEKQ6P5S7 137 aaKnown RBP6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 C18orf12Q96KH6 178 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 SFXN3Q9BWM7 321 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 ZDHHC8Q9ULC8 765 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 hCG_38984A0A1B0GV85 526 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 BMPR1BO00238 502 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 RIPPLY2Q5TAB7 128 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 COMMD1Q8N668 190 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 NTNG2Q96CW9 530 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 FBXL15Q9H469 300 aa6.98□□□□□ -1.29
PTPDC1-204ENST00000620992 LOC102723996A0A087X1L8 192 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 PHOX2AO14813 284 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 COL8A1P27658 744 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 RAB5CP51148 216 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 ABLIM2Q6H8Q1 611 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 CCDC144NLQ6NUI1 221 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 FOXL2NBQ6ZUU3 175 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 SSX8Q7RTT4 187 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 C1orf174Q8IYL3 243 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 SLC45A2Q9UMX9 530 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 IGSF23A1L1A6 192 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 CRXO43186 299 aaPredicted RBP6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 FAM106CPP0CH98 169 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 FCGR2BP31994 310 aaPredicted RBP6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 EMP1P54849 157 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 CCL20P78556 96 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 ETFRF1Q6IPR1 90 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 UNQ6494/PRO21346Q6UXR6 183 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 RBPMS2Q6ZRY4 209 aaKnown RBP6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 PRSS3P2Q8NHM4 247 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 NEIL1Q96FI4 390 aaPredicted RBP6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 PIMREGQ9BSJ6 248 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 PARD6AQ9NPB6 346 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 C19orf67A6NJJ6 358 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 TSTD3H0UI37 97 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 GATCO43716 136 aaKnown RBP6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 ZFP36L1Q07352 338 aaKnown RBP6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 NCMAPQ5T1S8 102 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 ZNF818PQ6ZRF7 136 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 FGFRL1Q8N441 504 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 NHLRC2Q8NBF2 726 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 FAM168AQ92567 244 aa6.97□□□□□ -1.29
PTPDC1-204ENST00000620992 MUC21A0A0G2JKD1 596 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 MUC21A0A140T8X8 626 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 CD1BP29016 333 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 GLRXP35754 106 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 MUC21Q5SSG8 566 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 FA2HQ7L5A8 372 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 TMEM252Q8N6L7 170 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 OR2D3Q8NGH3 330 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 TMEM222Q9H0R3 208 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 GP6Q9HCN6 339 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 TMEM106BQ9NUM4 274 aa6.96□□□□□ -1.29
PTPDC1-204ENST00000620992 FCN1O00602 326 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 PF4P02776 101 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 HTN3P15516 51 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 EGR1P18146 543 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 APOBEC3AP31941 199 aaPredicted RBP6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 SIGLECL1Q8N7X8 197 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 OR4A5Q8NH83 315 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 HS3ST6Q96QI5 342 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 RBFOX3A6NFN3 312 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 C11orf94C9JXX5 98 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 MMP9P14780 707 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 RPL8P62917 257 aaKnown RBP6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 PAFAH1B2P68402 229 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 TIMM23BQ5SRD1 257 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 GGNQ86UU5 652 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 COL25A1Q9BXS0 654 aaPredicted RBP6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 IGKV1D-13A0A0B4J2D9 117 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 CDS2O95674 445 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 LINC00869P0C866 280 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 IGKV1-13P0DP09 117 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 PDLIM4P50479 330 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 PRNTQ86SH4 94 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 LRTM2Q8N967 370 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 OR4D5Q8NGN0 318 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 WDYHV1Q96HA8 205 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 MEGF10Q96KG7 1140 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 OR4C12Q96R67 309 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 IL19Q9UHD0 177 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 PRNDQ9UKY0 176 aa6.96□□□□□ -1.3
PTPDC1-204ENST00000620992 IGHV2OR16-5A0A0B4J2B6 119 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 TMEM210A6NLX4 147 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 NTN3O00634 580 aaPredicted RBP6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 TGOLN2O43493 480 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 S1PR2O95136 353 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 MOSP00540 346 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 S100A8P05109 93 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 TM4SF20Q53R12 229 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 MIC13Q5XKP0 118 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 Q6ZPA2 131 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 SLC24A4Q8NFF2 622 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 FAM57AQ8TBR7 257 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 SPRR3Q9UBC9 169 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 PLXNB1O43157 2135 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 LIPFP07098 398 aa6.95□□□□□ -1.3
PTPDC1-204ENST00000620992 G0S2P27469 103 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms