RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 ONECUT1Q9UBC0 465 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 GCHFRP30047 84 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 PTGDSP41222 190 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 OR4A5Q8NH83 315 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 C1QTNF5Q9BXJ0 243 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 SCN10AQ9Y5Y9 1956 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 ZNF716A6NP11 495 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 H3BP45 60 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 CCL3P10147 92 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 CCL4P13236 92 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 COL8A1P27658 744 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 PRNTQ86SH4 94 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 ZNF502Q8TBZ5 544 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 TMEM56-RWDD3S4R434 201 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 TMEM189A5PLL7 270 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 PROB1E7EW31 1015 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 K7N7A8 449 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 CRYBB3P26998 211 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 SELENOTP62341 195 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 TMEM61Q8N0U2 210 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 OR10AG1Q8NH19 301 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 ZNF385AQ96PM9 386 aaKnown RBP2.62□□□□□ -1.99
LPP-221ENST00000618621 RNF7Q9UBF6 113 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 INSIG2Q9Y5U4 225 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 TAF1LQ8IZX4 1826 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 ARFGEF1Q9Y6D6 1849 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 CLPSL1A2RUU4 121 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 J3QR06 171 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 HIST1H1BP16401 226 aaKnown RBP2.62□□□□□ -1.99
LPP-221ENST00000618621 KCNMB1Q16558 191 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 AMMECR1LQ6DCA0 310 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 OR4X2Q8NGF9 303 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 GALNT14Q96FL9 552 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 C16orf92Q96LL3 132 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 RBKSQ9H477 322 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 CCL20P78556 96 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 TCF24Q7RTU0 167 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 SPSB2Q99619 263 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 CLN8Q9UBY8 286 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 TRAV39A0A0B4J263 110 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 IFITM1P13164 125 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 CCL2P13500 99 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 KIR2DL2P43627 348 aaPredicted RBP2.62□□□□□ -1.99
LPP-221ENST00000618621 CLDND2Q8NHS1 167 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 VOPP1Q96AW1 172 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 NDUFC2O95298 119 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 OR2H2O95918 312 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 IGLV3-21P80748 117 aaPredicted RBP2.62□□□□□ -1.99
LPP-221ENST00000618621 DMRTA1Q5VZB9 504 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 DLEC1Q9Y238 1755 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 IGHV1-45A0A0A0MS14 117 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 LOC107984156A0A0G2JMH3 177 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 FGF16O43320 207 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 ASPHD2Q6ICH7 369 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 ARL17AQ8IVW1 177 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 TMEM183AQ8IXX5 376 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 VN1R17PQ8TDU5 208 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 TNFRSF14Q92956 283 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 NPSP0C0P6 89 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 OR4A8P0C604 315 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 TRGC1P0CF51 173 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 MAS1LP35410 378 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 CLDN18P56856 261 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 PLP1P60201 277 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 COL10A1Q03692 680 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 DNASE2BQ8WZ79 361 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 A0A0J9YW62 118 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 TM4SF5O14894 197 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 FGF5P12034 268 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 SAP30LQ9HAJ7 183 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 GREB1Q4ZG55 1949 aa2.62□□□□□ -1.99
LPP-221ENST00000618621 A0A087WV48 116 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 H0YL77 283 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 MDKP21741 143 aaPredicted RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 OR8I2Q8N0Y5 310 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 TMEM52Q8NDY8 209 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 RCC1LQ96I51 464 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 ZNF488Q96MN9 340 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 GP6Q9HCN6 339 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 DOCK4Q8N1I0 1966 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 CCL1P22362 96 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 SOX8P57073 446 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 LYZP61626 148 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 MRPL54Q6P161 138 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 ERASQ7Z444 233 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 SMRP1Q8NCR6 262 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 OR51G1Q8NGK1 321 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 CYTL1Q9NRR1 136 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 LHFPL6Q9Y693 200 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 MEF2BQ02080 365 aaPredicted RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 C1QL2Q7Z5L3 287 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 ELOVL1Q9BW60 279 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 OPN3Q9H1Y3 402 aaPredicted RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 ASCL3Q9NQ33 180 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 MAST2Q6P0Q8 1798 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 TNRC6CQ9HCJ0 1690 aaKnown RBP2.61□□□□□ -1.99
LPP-221ENST00000618621 SPAARA0A1B0GVQ0 90 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 KBTBD11O94819 623 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 SPNS3Q6ZMD2 512 aa2.61□□□□□ -1.99
LPP-221ENST00000618621 C11orf44Q8N8P7 122 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms