RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 ATP6V1FQ16864 119 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 CR1LQ2VPA4 569 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 PDLIM3Q53GG5 364 aaPredicted RBP3.55□□□□□ -1.84
SEC22B-202ENST00000618538 CT45A1Q5HYN5 189 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 COA6Q5JTJ3 125 aaKnown RBP3.55□□□□□ -1.84
SEC22B-202ENST00000618538 ACTL10Q5JWF8 245 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 MIC13Q5XKP0 118 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 ZNF474Q6S9Z5 364 aaPredicted RBP3.55□□□□□ -1.84
SEC22B-202ENST00000618538 TMEM144Q7Z5S9 345 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 MOB3BQ86TA1 216 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 TMEM183AQ8IXX5 376 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 LINC00469Q8N7U9 141 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 C1orf162Q8NEQ5 155 aaPredicted RBP3.55□□□□□ -1.84
SEC22B-202ENST00000618538 OR5T1Q8NG75 326 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 OR1P1Q8NH06 330 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 CT45A3Q8NHU0 189 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 NINJ1Q92982 152 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 FAM122AQ96E09 287 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 NEIL1Q96FI4 390 aaPredicted RBP3.55□□□□□ -1.84
SEC22B-202ENST00000618538 LOXL4Q96JB6 756 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 HSD17B10Q99714 261 aaKnown RBP3.55□□□□□ -1.84
SEC22B-202ENST00000618538 ACTR3CQ9C0K3 210 aaPredicted RBP3.55□□□□□ -1.84
SEC22B-202ENST00000618538 PRO1933Q9H354 126 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 MANBALQ9NQG1 85 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 PLSCR4Q9NRQ2 329 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 LSM4Q9Y4Z0 139 aaKnown RBP3.55□□□□□ -1.84
SEC22B-202ENST00000618538 FAM215AQ9Y5M1 114 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 BSNQ9UPA5 3926 aa3.55□□□□□ -1.84
SEC22B-202ENST00000618538 CEP295Q9C0D2 2601 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 DCHS2Q6V1P9 2916 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 SAA2-SAA4A0A096LPE2 208 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.54□□□□□ -1.84
SEC22B-202ENST00000618538 K7EM74 188 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 K7EN84 100 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 PRRG2O14669 202 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 SPINT2O43291 252 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 NUPR1O60356 82 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 RBMXL2O75526 392 aaKnown RBP3.54□□□□□ -1.84
SEC22B-202ENST00000618538 NDUFB4O95168 129 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 LHBP01229 141 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TYMSP04818 313 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 SAA2P0DJI9 122 aaPredicted RBP3.54□□□□□ -1.84
SEC22B-202ENST00000618538 GPR12P47775 334 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 PDLIM4P50479 330 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 ZNF83P51522 516 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 LINC00310P59036 64 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 ZNF718Q3SXZ3 478 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 PRAMEF5Q5TYX0 476 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 PIP4P1Q86T03 277 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 MOGAT3Q86VF5 341 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 ZNF439Q8NDP4 499 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 SSMEM1Q8WWF3 244 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 CIB3Q96Q77 187 aaPredicted RBP3.54□□□□□ -1.84
SEC22B-202ENST00000618538 OR2V2Q96R30 315 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 PFDN5Q99471 154 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 SEPSECSQ9HD40 501 aaKnown RBP3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TMEM140Q9NV12 185 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 GNG12Q9UBI6 72 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 ZMAT5Q9UDW3 170 aaKnown RBP3.54□□□□□ -1.84
SEC22B-202ENST00000618538 JPT1Q9UK76 154 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 PITPNC1Q9UKF7 332 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 FUT9Q9Y231 359 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TCF19Q9Y242 345 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 NAV3Q8IVL0 2385 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 ARFGEF3Q5TH69 2177 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TANC2Q9HCD6 1990 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 IGKV1OR2-108A0A075B7D4 117 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 XKRY2A2RUG3 117 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 EREGO14944 169 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TMPRSS2O15393 492 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 YPEL1O60688 119 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 FOXH1O75593 365 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 HPRT1P00492 218 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 MBP02144 154 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 ADH4P08319 380 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 FTH1P19P0C7X4 201 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 STAG3L2P0CL84 134 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 STAG3L3P0CL85 134 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TMPRSS3P57727 454 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 SPCS3P61009 180 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 SSX2Q16385 188 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TMEM249Q2WGJ8 235 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 HLA-DRB5Q30154 266 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 FAM78BQ5VT40 261 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 BHLHA15Q7RTS1 189 aaPredicted RBP3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TCTEX1D1Q8N7M0 179 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 DEFB124Q8NES8 71 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 ITLN1Q8WWA0 313 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TMEM37Q8WXS4 190 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 ZCCHC14Q8WYQ9 949 aaKnown RBP3.54□□□□□ -1.84
SEC22B-202ENST00000618538 RAB1CQ92928 201 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 S100PBPQ96BU1 408 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 YPEL2Q96QA6 119 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 CALYQ9NYX4 217 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TP53TG3Q9ULZ0 132 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 PXMP4Q9Y6I8 212 aa3.54□□□□□ -1.84
SEC22B-202ENST00000618538 ZFHX2Q9C0A1 2572 aaPredicted RBP3.54□□□□□ -1.84
SEC22B-202ENST00000618538 TACC2O95359 2948 aa3.53□□□□□ -1.84
SEC22B-202ENST00000618538 CUL9Q8IWT3 2517 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms