RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ZNF45Q02386 682 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 IL18Q14116 193 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 C19orf35Q6ZS72 473 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 SLC25A42Q86VD7 318 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 ARRDC1Q8N5I2 433 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 DGCR14Q96DF8 476 aaKnown RBP12.31□□□□□ -0.44
BRCA1-228ENST00000618469 RSRP1Q9BUV0 290 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 SLIRPQ9GZT3 109 aaKnown RBP12.31□□□□□ -0.44
BRCA1-228ENST00000618469 CEPT1Q9Y6K0 416 aa12.31□□□□□ -0.44
BRCA1-228ENST00000618469 TRAV3A0A0B4J244 114 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 FAM223BA6NKX1 122 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 UPK2O00526 184 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 SAP30O75446 220 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 PGAM2P15259 253 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 AREGP15514 252 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 LPAR6P43657 344 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 EXOSC2Q13868 293 aaKnown RBP12.3□□□□□ -0.44
BRCA1-228ENST00000618469 TBC1D26Q86UD7 250 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 FAM223AQ8IWN6 122 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 TTC9CQ8N5M4 171 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 OR4D10Q8NGI6 311 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 SMIM4Q8WVI0 70 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 USMG5Q96IX5 58 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 RANGRFQ9HD47 186 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-228ENST00000618469 AKIP1Q9NQ31 210 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 SLC2A9Q9NRM0 540 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 ZNF257Q9Y2Q1 563 aa12.3□□□□□ -0.44
BRCA1-228ENST00000618469 NPIPB5A8MRT5 1133 aa12.29□□□□□ -0.44
BRCA1-228ENST00000618469 ZP3P21754 424 aa12.29□□□□□ -0.44
BRCA1-228ENST00000618469 G6PCP35575 357 aa12.29□□□□□ -0.44
BRCA1-228ENST00000618469 ECI1P42126 302 aa12.29□□□□□ -0.44
BRCA1-228ENST00000618469 UCP3P55916 312 aa12.29□□□□□ -0.44
BRCA1-228ENST00000618469 LHFPL1Q86WI0 220 aa12.29□□□□□ -0.44
BRCA1-228ENST00000618469 TMEM229BQ8NBD8 167 aa12.29□□□□□ -0.44
BRCA1-228ENST00000618469 MCFD2Q8NI22 146 aa12.29□□□□□ -0.44
BRCA1-228ENST00000618469 COMMD5Q9GZQ3 224 aa12.29□□□□□ -0.44
BRCA1-228ENST00000618469 ZMAT5Q9UDW3 170 aaKnown RBP12.29□□□□□ -0.44
BRCA1-228ENST00000618469 CGB1A6NKQ9 187 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 OR2J3O76001 311 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 RAB3DO95716 219 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 KRASP01116 189 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 TRBV12-3P01733 135 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 CD74P04233 296 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 REG1AP05451 166 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 PI3P19957 117 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 OR2B8PP59922 312 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 SSBP1Q04837 148 aaKnown RBP12.28□□□□□ -0.44
BRCA1-228ENST00000618469 SCGB2B2Q4G0G5 96 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 ZNF585BQ52M93 769 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 FAAP20Q6NZ36 180 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 STEAP1BQ6NZ63 245 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 ZNF343Q6P1L6 599 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 NECAP1Q8NC96 275 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 RABL2AQ9UBK7 228 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-228ENST00000618469 PEF1Q9UBV8 284 aaKnown RBP12.28□□□□□ -0.44
BRCA1-228ENST00000618469 RABL2BQ9UNT1 228 aa12.28□□□□□ -0.44
BRCA1-228ENST00000618469 TRBV9A0A0B4J1U6 114 aa12.27□□□□□ -0.45
BRCA1-228ENST00000618469 PSMB6P28072 239 aa12.27□□□□□ -0.45
BRCA1-228ENST00000618469 INSL3P51460 131 aa12.27□□□□□ -0.45
BRCA1-228ENST00000618469 ATP5G2Q06055 141 aa12.27□□□□□ -0.45
BRCA1-228ENST00000618469 C15orf32Q32M92 178 aa12.27□□□□□ -0.45
BRCA1-228ENST00000618469 ACSM6Q6P461 480 aa12.27□□□□□ -0.45
BRCA1-228ENST00000618469 PRR25Q96S07 402 aa12.27□□□□□ -0.45
BRCA1-228ENST00000618469 QTRT1Q9BXR0 403 aaKnown RBP12.27□□□□□ -0.45
BRCA1-228ENST00000618469 GAR1Q9NY12 217 aaKnown RBP12.27□□□□□ -0.45
BRCA1-228ENST00000618469 IGLC7A0M8Q6 106 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 CTDSPLO15194 276 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 LY86O95711 162 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 DHFRP00374 187 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 FGF2P09038 288 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 CTRB1P17538 263 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 PIGPP57054 158 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 MEF2DQ14814 521 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 RPEL1Q2QD12 228 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 CTRB2Q6GPI1 263 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 ZNF429Q86V71 674 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 ZNF486Q96H40 463 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-228ENST00000618469 NXF2Q9GZY0 626 aaKnown RBP12.26□□□□□ -0.45
BRCA1-228ENST00000618469 RBM38Q9H0Z9 239 aaKnown RBP12.26□□□□□ -0.45
BRCA1-228ENST00000618469 FAM212BQ9NTI7 297 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-228ENST00000618469 RSL24D1Q9UHA3 163 aaKnown RBP12.26□□□□□ -0.45
BRCA1-228ENST00000618469 FBXL7Q9UJT9 491 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 NSG2Q9Y328 171 aa12.26□□□□□ -0.45
BRCA1-228ENST00000618469 SNAPC5O75971 98 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 CRYGCP07315 174 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 DEFA4P12838 97 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 TNFSF8P32971 234 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 SYNJ2BPP57105 145 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 RND3P61587 244 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 OR4C16Q8NGL9 310 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 OR13C8Q8NGS7 320 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 MRGPRFQ96AM1 343 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 FANCD2OSQ96PS1 177 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 HINT2Q9BX68 163 aa12.25□□□□□ -0.45
BRCA1-228ENST00000618469 ZNF256Q9Y2P7 627 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-228ENST00000618469 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.24□□□□□ -0.45
BRCA1-228ENST00000618469 DISC1C4P0D8 188 aa12.24□□□□□ -0.45
BRCA1-228ENST00000618469 H0Y980 276 aa12.24□□□□□ -0.45
BRCA1-228ENST00000618469 IGKV1-39P01597 117 aa12.24□□□□□ -0.45
BRCA1-228ENST00000618469 IGHV3-23P01764 117 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms