RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 AKR1C2P52895 323 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 TAGLNQ01995 201 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 LRRC37A5PQ49AS3 106 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 FAM219AQ8IW50 185 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 SELENOHQ8IZQ5 122 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 SLC35G3Q8N808 338 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 C8orf31Q8N9H6 132 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 ZBTB8BQ8NAP8 495 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 ABHD14BQ96IU4 210 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 AIFM2Q9BRQ8 373 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 CACFD1Q9UGQ2 172 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 SESN1Q9Y6P5 492 aa13.83□□□□□ -0.2
TRAPPC3-209ENST00000616395 PCLOQ9Y6V0 5065 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 ST8SIA5O15466 376 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 OR2F2O95006 317 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 MPC2O95563 127 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 AMY1AP04745 511 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 S100A10P60903 97 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 OR2F1Q13607 317 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 MINOS1Q5TGZ0 78 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 KLHL30-AS1Q8NEE0 82 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 LSM10Q969L4 123 aaKnown RBP13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 MFFQ9GZY8 342 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 MINOS1-NBL1R4GNA1 71 aa13.82□□□□□ -0.2
TRAPPC3-209ENST00000616395 IGHV2-26A0A0B4J1V2 119 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 A0A1B0GU03 582 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 WRBO00258 174 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 TOR1AO14656 332 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 ARPC5O15511 151 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 ST8SIA3O43173 380 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 SNRNP70P08621 437 aaKnown RBP13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 PRRX1P54821 245 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 C9orf152Q5JTZ5 239 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 PRSS54Q6PEW0 395 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 LYZL2Q7Z4W2 148 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 C9orf62Q8N4C0 152 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 DCUN1D4Q92564 292 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 WDR89Q96FK6 387 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 CITED4Q96RK1 184 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 SLC25A33Q9BSK2 321 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 TMEM133Q9H2Q1 129 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 ZC4H2Q9NQZ6 224 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 SDHAF2Q9NX18 166 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 PRR13Q9NZ81 148 aa13.81□□□□□ -0.2
TRAPPC3-209ENST00000616395 M0R1X1 148 aa13.8□□□□□ -0.2
TRAPPC3-209ENST00000616395 SCGB1D2O95969 90 aa13.8□□□□□ -0.2
TRAPPC3-209ENST00000616395 ERVK-16P61578 105 aa13.8□□□□□ -0.2
TRAPPC3-209ENST00000616395 SLC25A48Q6ZT89 311 aaKnown RBP13.8□□□□□ -0.2
TRAPPC3-209ENST00000616395 ACOT7LQ6ZUV0 252 aa13.8□□□□□ -0.2
TRAPPC3-209ENST00000616395 SPAG16Q8N0X2 631 aa13.8□□□□□ -0.2
TRAPPC3-209ENST00000616395 OR10C1Q96KK4 312 aa13.8□□□□□ -0.2
TRAPPC3-209ENST00000616395 PAIP2BQ9ULR5 123 aaKnown RBP13.8□□□□□ -0.2
TRAPPC3-209ENST00000616395 SMAD5-AS1Q9Y6J3 95 aa13.8□□□□□ -0.2
TRAPPC3-209ENST00000616395 KANTRA0A1W2PQU2 76 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 RBFOX2O43251 390 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 RRASP10301 218 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 S100A11P31949 105 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 LPAR6P43657 344 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 ARHGDIBP52566 201 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 ZNF345Q14585 488 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 C9orf66Q5T8R8 295 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 FAM71F2Q6NXP2 309 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 OR10X1Q8NGY0 326 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 OR9G1Q8NH87 305 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 OR1S1Q8NH92 325 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 GRPEL2Q8TAA5 225 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 RAX2Q96IS3 184 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 RBM14Q96PK6 669 aaKnown RBP13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 AGMATQ9BSE5 352 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 CLEC7AQ9BXN2 247 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 PARP12Q9H0J9 701 aaKnown RBP13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 PLEKHA2Q9HB19 425 aa13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 ZNF256Q9Y2P7 627 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 AMMECR1Q9Y4X0 333 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC3-209ENST00000616395 E5RGE8 158 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 TSC22D2O75157 780 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 HPRT1P00492 218 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 IGLV2-14P01704 120 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 IGHV3-7P01780 117 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 NKX2-1P43699 371 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 GNG10P50151 68 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 VAMP2P63027 116 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 EIF5AP63241 154 aaKnown RBP13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 RTL8BQ17RB0 113 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 CT45A1Q5HYN5 189 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 OR11H4Q8NGC9 324 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 OR4P4Q8NGL7 312 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 OR4S2Q8NH73 311 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 CT45A3Q8NHU0 189 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 LEAP2Q969E1 77 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 IFI27L2Q9H2X8 130 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 NSG2Q9Y328 171 aa13.78□□□□□ -0.2
TRAPPC3-209ENST00000616395 CCL24O00175 119 aa13.77□□□□□ -0.21
TRAPPC3-209ENST00000616395 LY86O95711 162 aa13.77□□□□□ -0.21
TRAPPC3-209ENST00000616395 APOA2P02652 100 aa13.77□□□□□ -0.21
TRAPPC3-209ENST00000616395 DUTP33316 252 aaKnown RBP13.77□□□□□ -0.21
TRAPPC3-209ENST00000616395 RAB32Q13637 225 aa13.77□□□□□ -0.21
TRAPPC3-209ENST00000616395 H2BFWTQ7Z2G1 175 aa13.77□□□□□ -0.21
TRAPPC3-209ENST00000616395 LINC00311Q8N616 119 aa13.77□□□□□ -0.21
TRAPPC3-209ENST00000616395 ARL6Q9H0F7 186 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms