RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 DEFB123Q8N688 67 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 SF3B5Q9BWJ5 86 aaKnown RBP10.99□□□□□ -0.65
MSH6-214ENST00000616033 BOD1L1Q8NFC6 3051 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 LINC00473A8K010 186 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 MLNRO43193 412 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 ZNF207O43670 478 aaKnown RBP10.99□□□□□ -0.65
MSH6-214ENST00000616033 RPEL1Q2QD12 228 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 TEX43Q6ZNM6 134 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 TMEM144Q7Z5S9 345 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 LEAP2Q969E1 77 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 PRDM14Q9GZV8 571 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 MS4A5Q9H3V2 200 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 HSPB7Q9UBY9 170 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 OR7C2O60412 319 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 NEURL1O76050 574 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 GPR6P46095 362 aaPredicted RBP10.99□□□□□ -0.65
MSH6-214ENST00000616033 SCCPDHQ8NBX0 429 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 OR4A16Q8NH70 328 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 RNF138Q8WVD3 245 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 C20orf144Q9BQM9 153 aa10.99□□□□□ -0.65
MSH6-214ENST00000616033 MCRIP2Q9BUT9 160 aaKnown RBP10.99□□□□□ -0.65
MSH6-214ENST00000616033 PLXNB1O43157 2135 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 TRAV3A0A0B4J244 114 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 C12orf77C9JDV5 145 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 DKK1O94907 266 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 IGLV3-19P01714 112 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 HBZP02008 142 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 CELA3BP08861 270 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 OR9G9P0C7N8 305 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 MYOD1P15172 320 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 CAMPP49913 170 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 RIPPLY2Q5TAB7 128 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 LINC00696Q6ZRV3 163 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 CENPVQ7Z7K6 275 aaPredicted RBP10.98□□□□□ -0.65
MSH6-214ENST00000616033 SPEM1Q8N4L4 309 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 COX11Q9Y6N1 276 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 BDP1A6H8Y1 2624 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 RNF212BA8MTL3 300 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 HSBP1L1C9JCN9 74 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 HYPMO75409 117 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 CER1O95813 267 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 FOXL1Q12952 345 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 ZNF841Q6ZN19 808 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 C5orf30Q96GV9 206 aa10.98□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A10PA6NDY2 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A18PA6NE21 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A16PA6NEW6 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A20PA6NIJ5 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A8PA6NJQ4 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A7PA6NKC0 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A22PA8MWA6 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A12PA8MX19 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A5PA8MXJ8 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A23PA8MXZ1 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A15PP0C7V4 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A13PP0C7W8 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A14PP0C7W9 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 FAM90A24PP0C7X0 464 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 B3GALT5-AS1P59052 145 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 PSG5Q15238 335 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 ZNF439Q8NDP4 499 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 PLEKHA3Q9HB20 300 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 KCNIP2Q9NS61 270 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 GNG12Q9UBI6 72 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 TIMM9Q9Y5J7 89 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 TANC2Q9HCD6 1990 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 YLPM1P49750 1951 aaKnown RBP10.97□□□□□ -0.65
MSH6-214ENST00000616033 DPRXA6NFQ7 191 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 GPX1P07203 203 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 C3orf79P0CE67 100 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 SRD5A2P31213 254 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 IL36BQ9NZH7 164 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 CD24P25063 80 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 GNG4P50150 75 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 UBE2NP61088 152 aaKnown RBP10.97□□□□□ -0.65
MSH6-214ENST00000616033 RNPS1Q15287 305 aaKnown RBP10.97□□□□□ -0.65
MSH6-214ENST00000616033 RNASEKQ6P5S7 137 aaKnown RBP10.97□□□□□ -0.65
MSH6-214ENST00000616033 Q6ZS49 121 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 SSBP4Q9BWG4 385 aaPredicted RBP10.97□□□□□ -0.65
MSH6-214ENST00000616033 CLEC5AQ9NY25 188 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 KMT2EQ8IZD2 1858 aa10.97□□□□□ -0.65
MSH6-214ENST00000616033 C15orf62A8K5M9 175 aa10.96□□□□□ -0.65
MSH6-214ENST00000616033 TNFSF4P23510 183 aa10.96□□□□□ -0.65
MSH6-214ENST00000616033 CENPWQ5EE01 88 aa10.96□□□□□ -0.65
MSH6-214ENST00000616033 MRPL14Q6P1L8 145 aaKnown RBP10.96□□□□□ -0.65
MSH6-214ENST00000616033 CORO2AQ92828 525 aa10.96□□□□□ -0.65
MSH6-214ENST00000616033 SPSB4Q96A44 273 aa10.96□□□□□ -0.65
MSH6-214ENST00000616033 HSD17B10Q99714 261 aaKnown RBP10.96□□□□□ -0.65
MSH6-214ENST00000616033 STRADBQ9C0K7 418 aa10.96□□□□□ -0.65
MSH6-214ENST00000616033 CNOT1A5YKK6 2376 aaKnown RBP10.96□□□□□ -0.65
MSH6-214ENST00000616033 IGHV3-48P01763 117 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 FOLR3P41439 243 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 UQCRFS1P47985 274 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 SMAGPQ0VAQ4 97 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 LHFPL4Q7Z7J7 247 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 MOB3BQ86TA1 216 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 AGBL5Q8NDL9 886 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 IMMP1LQ96LU5 166 aa10.96□□□□□ -0.66
MSH6-214ENST00000616033 UQCR10Q9UDW1 63 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms