RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 SCO2A0A1W2PP80 73 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 ZNF506Q5JVG8 444 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 MS4A10Q96PG2 267 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 RNF2Q99496 336 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 IFT22Q9H7X7 185 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 SRD5A3Q9H8P0 318 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 CARHSP1Q9Y2V2 147 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 LOC105371242A0A075B767 164 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 C17orf100A8MU93 164 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 TCTAP57738 103 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 LY6EQ16553 131 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 WDR86Q86TI4 376 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 OR8I2Q8N0Y5 310 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 WDR31Q8NA23 367 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 OR2D3Q8NGH3 330 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 SNRNP40Q96DI7 357 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 TRAV34A0A0B4J273 112 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 OR2J3O76001 311 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 CGAP01215 116 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 P01737 135 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 SRP19P09132 144 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 SAA1P0DJI8 122 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 SGMS2Q8NHU3 365 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 ZCCHC14Q8WYQ9 949 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 SLC25A15Q9Y619 301 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 WDR87Q6ZQQ6 2873 aa7.44□□□□□ -1.22
PDLIM5-222ENST00000615540 UCNP55089 124 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 MIR17HGQ75NE6 70 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 NPIPB3Q92617 1050 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 ASXL3Q9C0F0 2248 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 CDK2AP1O14519 115 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 FGF16O43320 207 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 CSRP1P21291 193 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 NUBP1P53384 320 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 IGHV3-66A0A0C4DH42 116 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 IGKV1-6A0A0C4DH72 117 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 C20orf202A1L168 122 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 APCSP02743 223 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 CFPP27918 469 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 FAM90A1Q86YD7 464 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 OR9G1Q8NH87 305 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 NABP2Q9BQ15 211 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 ALPK3Q96L96 1907 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 IGHV3-35A0A0C4DH35 117 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 B9A039 149 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 ZNF474Q6S9Z5 364 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 ZNF596Q8TC21 504 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 RBM14Q96PK6 669 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 CLEC7AQ9BXN2 247 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 ELOA3CA0A087WX78 387 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 SEC14L6B5MCN3 397 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 HYPMO75409 117 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 IGKV1-5P01602 117 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 CRISP2P16562 243 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 HLA-DRB5Q30154 266 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 DUX4L9Q6RFH8 374 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 WFDC3Q8IUB2 231 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 VAMP8Q9BV40 100 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 FBXL15Q9H469 300 aa7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 PHF3Q92576 2039 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-222ENST00000615540 NAPSAO96009 420 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 OR4C13Q8NGP0 309 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 COQ2Q96H96 371 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 ZNF430Q9H8G1 570 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 KIF26BQ2KJY2 2108 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 LINC00473A8K010 186 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 M0R2Z0 102 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 PAX6P26367 422 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 G0S2P27469 103 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 HTR1DP28221 377 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 GCHFRP30047 84 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 OR10W1Q8NGF6 305 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 MARVELD3Q96A59 401 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 CABIN1Q9Y6J0 2220 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 A0A1W2PNU3 283 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 KBTBD11O94819 623 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 SRP14P37108 136 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 CCL19Q99731 98 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 CHRDL1Q9BU40 450 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 IGKV1D-33P01593 117 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 IGKV1-33P01594 117 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 TDGF1P13385 188 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 LINC00305Q7Z4B0 112 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 GLRX5Q86SX6 157 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 DOLPP1Q86YN1 238 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 IGKV1D-17A0A075B6S4 117 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 IGHV3OR16-8A0A075B7F1 116 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 DKK1O94907 266 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 FCGR2BP31994 310 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 PRR31Q5SQ13 230 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 TCTEX1D1Q8N7M0 179 aa7.42□□□□□ -1.22
PDLIM5-222ENST00000615540 GRIFINA4D1Z8 144 aa7.41□□□□□ -1.22
PDLIM5-222ENST00000615540 C1QTNF9BB2RNN3 333 aa7.41□□□□□ -1.22
PDLIM5-222ENST00000615540 SLC17A3O00476 420 aa7.41□□□□□ -1.22
PDLIM5-222ENST00000615540 GOSR1O95249 250 aa7.41□□□□□ -1.22
PDLIM5-222ENST00000615540 Q8WTZ3 238 aa7.41□□□□□ -1.22
PDLIM5-222ENST00000615540 TMEM186Q96B77 213 aa7.41□□□□□ -1.22
PDLIM5-222ENST00000615540 SSBP3Q9BWW4 388 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-222ENST00000615540 MIOXQ9UGB7 285 aa7.41□□□□□ -1.22
PDLIM5-222ENST00000615540 PGPA6NDG6 321 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms